.png){kind=icon}
返回
A cloud-based enhanced differential evolution algorithm for parameter estimation problems in computational systems biology
.png){kind=icon}
PRE
AI
DOI：10.1007/s10586-017-0860-1.png)
.png){kind=icon}
原文求助.png){kind=icon}
分享.png){kind=icon}
收藏
摘要
En 中文
Metaheuristics are gaining increasing recognition in many research areas, computational systems biology among them. Recent advances in metaheuristics can be helpful in locating the vicinity of the global solution in reasonable computation times, with Differential Evolution (DE) being one of the most popular methods. However, for most realistic applications, DE still requires excessive computation times. With the advent of Cloud Computing effortless access to large number of distributed resources has become more feasible, and new distributed frameworks, like Spark, have been developed to deal with large scale computations on commodity clusters and cloud resources. In this paper we propose a parallel implementation of an enhanced DE using Spark. The proposal drastically reduces the execution time, by means of including a selected local search and exploiting the available distributed resources. The performance of the proposal has been thoroughly assessed using challenging parameter estimation problems from the domain of computational systems biology. Two different platforms have been used for the evaluation, a local cluster and the Microsoft Azure public cloud. Additionally, it has been also compared with other parallel approaches, another cloud-based solution (a MapReduce implementation) and a traditional HPC solution (a MPI implementation).
Keyword:
Parallel metaheuristics
Differential evolution
Local search
Cloud computing
Spark
AI总结
对已上传原文的论文进行重点信息的提取，主要内容包括：简要概述、研究摘要、背景介绍、关键亮点、图文解析、展望与总结。
期刊
C
IF:
4.1
论文数:
5.0K
被引数:
7.5K
机构
引用论文
On the nature of canine aural haematoma and its treatment with continuous vacuum drainage关于犬耳血肿的性质及其连续负压引流治疗
.png){kind=icon}
PREAI
分享收藏Evaluation of disease severity caused by Bean golden mosaic virus in different bean cultivars不同豆类品种中Bean golden mosaic virus致病严重程度的评估
PREAI
分享收藏
分享收藏分享收藏
查看更多内容