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A developed DNA extraction method for different soil samples

delete2010-07-27
delete13
PRE
AI
Y
Yingchang Hu
Z
Zhiheng Liu
V
Van, Jianfang
齐
齐晓辉 (Xiaohui Qi)
李晶 封面图
李晶 (Jing Li)
Z
Zhong, Shiqi
J
Jicheng Yu
刘秋 封面图
刘秋 (Qiu Liu) *
DOI:10.1002/jobm.200900373delete
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摘要

摘要

En 中文
Four DNA extraction methods namely SDS-hyperhaline method (I), modified SDS-hyperhaline method (II), indirect method (III), alkaline lysis method (IV) were evaluated by comparing DNA yield, spectrophotometric quality, genomic integrity and PCR suitability in this paper. The results showed that high DNA yields were obtained by method I, II and IV. However, higher quality of DNA was gained by method III and IV. Based on the results of the Pulsed-Field Gel Electrophoresis (PFGE), the completeness of DNA extracted by method IV was the best. About 6.0 mu g DNA can be recovered from 1.0 g soil by method IV which involved to lysis cell by SDS and to precipitate impurities by adding potassium acetate and magnesium chloride Therefore, it is confirmed that method IV is a novel, reliable and versatile method for large-scale DNA extraction involving less purification steps for various soil samples.
Keyword:
Soil sample
Humic acid
DNA extraction
PCR amplification
PFGE

期刊

Journal of Basic Microbiology 封面图
Journal of Basic Microbiology
IF:
2.7
论文数:
2.7K
被引数:
4.8K

机构

L
Liaoning Normal University
学者数:
4.2K
论文数: 2.5K
被引数: 2.1K
D
Dalian Minzu University
学者数:
2.0K
论文数: 1.7K
被引数: 2.6K
S
Shenyang Agricultural University
学者数:
9.0K
论文数: 4.3K
被引数: 18
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