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A rigid body framework for multicellular modeling

delete2021-11-25
delete9
PRE
AI
P
Phillip J. Brown
J
J. E. F. Green
B
Benjamin J. Binder *
J
James M. Osborne *
DOI:10.1038/s43588-021-00154-4delete
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摘要

摘要

En 中文
Off-lattice models are a well-established approach in multicellular modeling, where cells are represented as points that are free to move in space. The representation of cells as point objects is useful in a wide range of settings, particularly when large populations are involved; however, a purely point-based representation is not naturally equipped to deal with objects that have length, such as cell boundaries or external membranes. Here we introduce an off-lattice modeling framework that exploits rigid body mechanics to represent objects using a collection of conjoined one-dimensional edges in a viscosity-dominated system. This framework can be used to represent cells as free moving polygons, to allow epithelial layers to smoothly interact with themselves, to model rod-shaped cells such as bacteria and to robustly represent membranes. We demonstrate that this approach offers solutions to the problems that limit the scope of current off-lattice multicellular models.
Keyword:
IN-SITU DCIS
INTESTINAL CRYPT
CELL
MECHANICS
GROWTH
ORGANIZATION

期刊

Nature Computational Science 封面图
Nature Computational Science
IF:
18.3
论文数:
3.1K
被引数:
4.0K

机构

U
University of Adelaide
学者数:
2.3W
论文数: 2.4W
被引数: 4.2W
U
university of melbourne
学者数:
5.7W
论文数: 5.4W
被引数: 69
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