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A Segmentation-Guided Deep Learning Framework for Leaf Counting

delete2022-05-19
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范
范习健 (Xijian Fan) *
R
Rui Zhou
T
Tardi Tjahjadi
S
Sruti Das Choudhury
Q
Qiaolin Ye
DOI:10.3389/fpls.2022.844522delete
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摘要

摘要

En 中文
Deep learning-based methods have recently provided a means to rapidly and effectively extract various plant traits due to their powerful ability to depict a plant image across a variety of species and growth conditions. In this study, we focus on dealing with two fundamental tasks in plant phenotyping, i.e., plant segmentation and leaf counting, and propose a two-steam deep learning framework for segmenting plants and counting leaves with various size and shape from two-dimensional plant images. In the first stream, a multi-scale segmentation model using spatial pyramid is developed to extract leaves with different size and shape, where the fine-grained details of leaves are captured using deep feature extractor. In the second stream, a regression counting model is proposed to estimate the number of leaves without any pre-detection, where an auxiliary binary mask from segmentation stream is introduced to enhance the counting performance by effectively alleviating the influence of complex background. Extensive pot experiments are conducted CVPPP 2017 Leaf Counting Challenge dataset, which contains images of Arabidopsis and tobacco plants. The experimental results demonstrate that the proposed framework achieves a promising performance both in plant segmentation and leaf counting, providing a reference for the automatic analysis of plant phenotypes.
Keyword:
plant phenotyping
segmentation
deep CNN architecture
leaf counting
multiple traits
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期刊

Frontiers in Plant Science 封面图
Frontiers in Plant Science
IF:
4.8
论文数:
3.4W
被引数:
14.7W

机构

N
Nanjing Forestry University
学者数:
2.0W
论文数: 1.6W
被引数: 3.2W
University of Nebraska System 封面图
University of Nebraska System
学者数:
2.7W
论文数: 2.3W
被引数: 58
U
University of Warwick
学者数:
2.2W
论文数: 2.2W
被引数: 85
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引用论文

引用论文

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Crop Phenomics and High-Throughput Phenotyping: Past Decades, Current Challenges, and Future Perspectives
err2020-02-01
err493
errOAAI
errYang, Wanneng; Feng, Hui; Zhang, Xuehai; Zhang, Jian; Doonan, John H.; Batchelor, William David; Xiong, Lizhong; Yan, Jianbing
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