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CryoLike: a Python package for cryo-electron microscopy image-to-structure likelihood calculations

delete2025-12-01
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PRE
AI
W
Wai Shing Tang
J
Jeff Soules
A
Aaditya V. Rangan
P
Pilar Cossio *
DOI:10.1107/S2059798325009350delete
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摘要

摘要

En 中文
Extracting conformational heterogeneity from cryo-electron microscopy (cryo-EM) images is particularly challenging for flexible biomolecules, where traditional 3D classification approaches often fail. Over the past few decades, advancements in experimental and computational techniques have been made to tackle this challenge, especially Bayesian-based approaches that provide physically interpretable insights into cryo-EM heterogeneity. To reduce the computational cost for Bayesian approaches, and building upon previously developed Fourier-Bessel image-representation methods, we created CryoLike, computationally efficient software for evaluating image-to-structure (or imageto-volume) likelihoods across large image data sets, packaged in a user-friendly Python workflow.
Keyword:
cryo-EM
molecular modeling
molecular dynamics
Bayesian inference.

期刊

A
Acta Crystallographica Section D-Structural Biology
IF:
3.8
论文数:
64
被引数:
0

机构

S
Simons Foundation
学者数:
200
论文数: 135
被引数: 1.1K