arrow
返回

Deep Evolutionary Learning for Molecular Design

delete2022-05-01
delete14
delete
OA
AI
K
Karl Grantham
M
Muhetaer Mukaidaisi
H
Hsu Kiang Ooi
M
Mohammad Sajjad Ghaemi
A
Alain Tchagang
李一峰 封面图
李一峰 (Yifeng Li) *
DOI:10.1109/MCI.2022.3155308delete
delete原文链接
delete原文求助
delete分享
delete收藏
摘要

摘要

En 中文
In this paper, a prototypical deep evolutionary learning (DEL) process is proposed to integrate deep generative model and multi-objective evolutionary computation for molecular design. Our approach enables (1) evolutionary operations in the latent space of the generative model, rather than the structural space, to generate promising novel molecular structures for the next evolutionary generation, and (2) generative model fine-tuning using newly generated high-quality samples. Thus, DEL implements a data-model co-evolution concept which improves both sample population and generative model learning. Experiments on public datasets indicate that the sample population obtained by DEL exhibits improvement on property distributions, and dominates samples generated by other baseline molecular optimization algorithms. Furthermore, comparisons with a range of deep generative models show that DEL is beneficial for improving sample populations.
Keyword:
Computational modeling
Social factors
Evolutionary computation
Statistics
Optimization
Deep learning
Generative adversarial networks
Molecular computing

期刊

IEEE Computational Intelligence Magazine 封面图
IEEE Computational Intelligence Magazine
IF:
11.2
论文数:
606
被引数:
3.1K

机构

B
Brock University
学者数:
2.7K
论文数: 3.1K
被引数: 3.1K
N
National Research Council Canada
学者数:
7.9K
论文数: 7.9K
被引数: 6.8K
引用论文

引用论文

The Relationship of Body Mass and Fat Distribution With Incident Hypertension
err2014-09-01
err0
PREAI
errAlvin Chandra; Ian J. Neeland; Jarett D. Berry; Colby R. Ayers; Anand Rohatgi; Sandeep R. Das; Amit Khera; Darren K. McGuire; James A. de Lemos; Aslan T. Turer
err分享
err收藏
Geometric deep learning on molecular representations分子表征的几何深度学习
err2021-12-15
err160
PREAI
errAtz, Kenneth; Grisoni, Francesca; Schneider, Gisbert
err分享
err收藏
How to explore chemical space using algorithms and automation如何使用算法和自动化探索化学空间
err2019-01-15
err169
PREAI
errGromski, Piotr S.; Henson, Alon B.; Granda, Jaroslaw M.; Cronin, Leroy
err分享
err收藏
EvoMol: a flexible and interpretable evolutionary algorithm for unbiased de novo molecular generation
err2020-09-16
err34
errOAAI
errLeguy, Jules; Cauchy, Thomas; Glavatskikh, Marta; Duval, Beatrice; Da Mota, Benoit
err分享
err收藏
Optimization of Molecules via Deep Reinforcement Learning通过深度强化学习优化分子
err2019-07-24
err367
errOAAI
errZhou, Zhenpeng; Kearnes, Steven; Li, Li; Zare, Richard N.; Riley, Patrick
err分享
err收藏
PubChem BioAssay: 2017 updatePubChem BioAssay: 2017更新
err2016-11-29
err416
errOAAI
errWang, Yanli; Bryant, Stephen H.; Cheng, Tiejun; Wang, Jiyao; Gindulyte, Asta; Shoemaker, Benjamin A.; Thiessen, Paul A.; He, Siqian; Zhang, Jian
err分享
err收藏
Designing neural networks through neuroevolution通过神经进化设计神经网络
err2019-01-07
err417
PREAI
errStanley, Kenneth O.; Clune, Jeff; Lehman, Joel; Miikkulainen, Risto
err分享
err收藏
Automatic Chemical Design Using a Data-Driven Continuous Representation of Molecules使用数据驱动的分子连续表示的自动化学设计
err2018-01-12
err2.5K
errOAAI
errGomez-Bombarelli, Rafael; Wei, Jennifer N.; Duvenaud, David; Hernandez-Lobato, Jose Miguel; Sanchez-Lengeling, Benjamin; Sheberla, Dennis; Aguilera-Iparraguirre, Jorge; Hirzel, Timothy D.; Adams, Ryan P.; Aspuru-Guzik, Alan
err分享
err收藏
学者 查看更多内容