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Efficient Shift-and-Invert Preconditioning for Multi-GPU Accelerated Density Functional Calculations

delete2024-08-27
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J
Jeheon Woo
W
Woo Youn Kim *
S
Sunghwan Choi *
DOI:10.1021/acs.jctc.4c00721delete
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摘要

摘要

En 中文
To accelerate the iterative diagonalization of electronic structure calculations, we propose a new inexact shift-and-invert (ISI) preconditioning method. The key idea is to improve shift values in the ISI preconditioning to be closer to the exact eigenvalues, leading to a significant boost in the convergence speed of the iterative diagonalization. Furthermore, we adopted a preconditioned conjugate gradient solver to rapidly evaluate an inversion process. Finally, we accelerated overall processes, including the proposed modification, with state-of-the-art graphical processing units (GPUs) and assessed its parallel efficiency with real-space density functional calculations of 1D, 2D, and 3D periodic systems. Our method attains both fast diagonalization convergence and high multi-GPU parallel efficiency. This is evident from the fact that single-point density functional calculations for hundreds of atom systems can be done in approximately 10 s using 8 GPUs. The proposed method can be generally applied to any electronic structure calculation methods involving large-scale diagonalizations.
Keyword:
EIGENVALUE PROBLEMS
DIAGONALIZATION
MATRIX
LANCZOS
OPTIMIZATION
CONVERGENCE
EIGENSOLVER
ALGORITHM
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期刊

Journal of Chemical Theory and Computation 封面图
Journal of Chemical Theory and Computation
IF:
5.5
论文数:
1.1W
被引数:
5.4W

机构

I
Inha University
学者数:
1.1W
论文数: 1.1W
被引数: 1.1W
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