Genetic algorithm for optimization and specification of a neuron model

William Christopher Gerken

doi:10.1016/j.neucom.2005.12.041

Genetic algorithm for optimization and specification of a neuron model

2006-06-01

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William Christopher Gerken

DOI：10.1016/j.neucom.2005.12.041

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We present a novel approach for neuron model specification using a genetic algorithm (GA) to develop simple firing neuron models consisting of a single compartment with one inward and one outward current. The GA not only chooses the model parameters, but also chooses the formulation of the ionic currents (i.e. single-state variable, two-state variable, instantaneous, or leak). The fitness function of the GA compares the frequency output of the GA-generated models to an I-F curve of a nominal Morris-Lecar (ML) model. Initially, several different classes of models compete within the population. Eventually, the GA converges to a population containing only ML-type firing models, that is, models with an instantaneous inward and single-state variable outward current. Simulations where ML-type models are restricted from the population are also investigated. This GA approach allows the exploration of a universe of feasible model classes that is less constrained by model formulation assumptions than traditional parameter estimation approaches. (c) 2006 Elsevier B.V. All rights reserved.

Keyword:

genetic algorithm

neuron model

Morris-Lecar

model specification

parameter optimization

Genetic algorithm for optimization and specification of a neuron model

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