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GPU-Accelerated Graph-Based Semiempirical Quantum Chemistry

delete2025-10-01
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PRE
AI
M
Maksim Kulichenko
S
Stanton, Robert M.
C
Cheng-Han Li
N
Nicholas Lubbers
W
Wagreich, Michael
M
Michael E. Wall
C
Christian F. A. Negre
J
Joshua Finkelstein
A
Anders M. N. Niklasson *
DOI:10.1021/acs.jctc.5c00936delete
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摘要

摘要

En 中文
Graph-based electronic structure theory offers a scalable approach to study large, complex atomistic systems using distributed and hybrid computational platforms. We demonstrate the coupling of graph-based linear scaling electronic structure theory, as implemented in the Scalable Ecosystem, Driver, and Analyzer for Complex Chemistry Simulations (SEDACS), with semiempirical quantum chemistry methods as implemented in the PySEQM code, with Graphics Processing Unit (GPU) acceleration. This powerful combination enables efficient, scalable electronic structure calculations over many nodes, significantly reducing computational cost while naturally harnessing parallelism. Detailed analyses of parallelization efficiency, computational accuracy, and communication overheads are provided, highlighting an order-of-magnitude speedup for systems of up to 10,000 atoms.
Keyword:
MATRIX-MATRIX MULTIPLICATION
LINEAR SCALING COMPUTATION
ELECTRONIC-STRUCTURE
DENSITY-MATRIX
GRAMICIDIN-S
MODELING PHOTOPHYSICS
NDDO APPROXIMATIONS
SPARSE
IMPLEMENTATION
OPTIMIZATION

期刊

Journal of Chemical Theory and Computation 封面图
Journal of Chemical Theory and Computation
IF:
5.5
论文数:
1.1W
被引数:
5.4W

机构

U
united states department of energy (doe)
学者数:
11.3W
论文数: 9.6W
被引数: 246
L
Los Alamos National Laboratory
学者数:
9.6K
论文数: 6.7K
被引数: 1.9W
引用论文

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