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Graph-based Automated Macro-Molecule Assembly

delete2022-08-08
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PRE
AI
F
Florian Spenke
B
Bernd Hartke *
DOI:10.1021/acs.jcim.2c00609delete
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摘要

摘要

En 中文
We present a general molecular framework assembly algorithm that takes a largely arbitrary molecular fragment database and a user-supplied target template graph as input. Automatic assembly of molecular fragments from the database, following a prescribed, user-supplied set of connection rules, then turns the template graph into an actual, chemically reasonable molecular framework. Assembly capabilities of our algorithm are tested by producing several abstract, closed-loop shapes. To indicate a few of many possible application areas we demonstrate a host-guest complex and a road toward catalysis. Postassembly substituent exchange can be used to produce electric fields of desired values at desired points inside the framework or at its surface as a stepping stone toward rationally designed, artificial heterogeneous catalysts.
Keyword:
ORIENTED ELECTRIC-FIELDS
RELATE 2 SETS
CHEMICAL UNIVERSE
DESIGN
DISCOVERY
PROTEINS
ROTATION
EXPLORE
SPACE
MOF

期刊

Journal of Chemical Information and Modeling 封面图
Journal of Chemical Information and Modeling
IF:
5.3
论文数:
9.1K
被引数:
4.0W

机构

U
university of kiel
学者数:
2.3W
论文数: 1.8W
被引数: 15
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