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High-throughput transcriptomics
DOI:10.1038/s41598-022-23985-1.png)
摘要
En 中文
High-throughput transcriptomics has revolutionised the field of transcriptome research by offering a cost-effective and powerful screening tool. Standard bulk RNA sequencing (RNA-Seq) enables characterisation of the average expression profiles for individual samples and facilitates identification of the molecular functions associated with genes differentially expressed across conditions. RNA-Seq can also be applied to disentangle splicing variants and discover novel transcripts, thus contributing to a comprehensive understanding of the transcriptome landscape. A closely related technique, single-cell RNA-Seq, has enabled the study of cell-type-specific gene expressions in hundreds to thousands of cells, aiding the exploration of cell heterogeneity. Nowadays, bulk RNA-Seq and single-cell RNA-Seq serve as complementary tools to advance and accelerate the development of transcriptome-based resources. This Collection illustrates how the current global research community makes use of these techniques to address a broad range of questions in life sciences. It demonstrates the usefulness and popularity of high-throughput transcriptomics and presents the best practices and potential issues for the benefit of future end-users.
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期刊
IF:
3.9
论文数:
28.3W
被引数:
105.6W
机构
引用论文
A high plane of nutrition during early life alters the hypothalamic transcriptome of heifer calves
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Transcriptomic profiling and functional prediction reveal aberrant expression of circular RNAs during osteogenic differentiation in human umbilical cord mesenchymal stromal cells
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Time-series RNA-Seq transcriptome profiling reveals novel insights about cold acclimation and de-acclimation processes in an evergreen shrub of high altitude
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Gut mucosa dissociation protocols influence cell type proportions and single-cell gene expression levels
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Ischemic heart injury leads to HIF1-dependent differential splicing of CaMK2γ
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Transcriptome analysis of human dermal fibroblasts following red light phototherapy
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A flexible microfluidic system for single-cell transcriptome profiling elucidates phased transcriptional regulators of cell cycle
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Long read, isoform aware sequencing of mouse nucleus accumbens after chronic cocaine treatment
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Verifying explainability of a deep learning tissue classifier trained on RNA-seq data
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