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Knowledge-guided multi-modality transformer for multi-label genetic mutation prediction

delete2026-01-16
delete0
PRE
AI
G
Gexin Huang
C
Chenfei Wu
M
Mingjie Li
X
Xiaojun Chang
Y
Ying Sun
L
Lei Xing
X
X. Liang
L
Liang Lin
G
Guang Yang
S
Shen Zhao
DOI:10.1016/j.patcog.2026.113047delete
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摘要

摘要

En 中文
• The first work to propose a multi-label framework for predicting genetic mutations from whole slide images (WSIs). • Intrinsic biological knowledge is incorporated to capture gene dependencies, enabling the model to reason about mutations in a multi-label context. • A graph-based gene encoder is proposed to capture linguistic, phenotypic, and pathway-level associations. • A label decoder is proposed to align gene priors with spatial WSI features and employs a comparative multi-label loss to improve discrimination across mutation statuses. • The framework improves accuracy and interpretability, and is validated on 9 TCGA cancer types.

期刊

Pattern Recognition 封面图
Pattern Recognition
IF:
7.6
论文数:
1.3W
被引数:
4.5W

机构

G
Guangdong University
学者数:
8
论文数: 2
被引数: 0
S
Sun Yat-sen University
学者数:
3.7K
论文数: 1.1K
被引数: 1.6W
S
sun yat-sen university cancer center
学者数:
70
论文数: 17
被引数: 0
S
Stanford University
学者数:
9.6W
论文数: 8.2W
被引数: 17.0W
U
University of Technology Sydney
学者数:
457
论文数: 318
被引数: 3.2W
I
Imperial College London
学者数:
8.3W
论文数: 7.3W
被引数: 11.1W
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