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Ligand-Based Virtual Screening Using Bayesian Networks

delete2010-05-26
delete66
PRE
AI
A
Ammar Abdo *
B
Beining Chen
C
Christoph Mueller
N
Naomie Salim
P
Peter Willett
DOI:10.1021/ci100090pdelete
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摘要

摘要

En 中文
A Bayesian inference network (BIN) provides an interesting alternative to existing tools for similarity-based virtual screening. The BIN is particularly effective when the active molecules being sought have a high degree of structural homogeneity but has been found to perform less well with structurally heterogeneous sets of actives. In this paper, we introduce an alternative network model, called a Bayesian belief network (BBN), that seeks to overcome this limitation of the BIN approach. Simulated virtual screening experiments with the MDDR, WOMBAT and MUV data sets show that the BIN and BBN methods allow effective screening searches to be carried out. However, the results obtained are not obviously superior to those obtained using a much simpler approach that is based on the use of the Tanimoto coefficient and of the square roots of fragment occurrence frequencies.
Keyword:
MOLECULAR SIMILARITY

期刊

Journal of Chemical Information and Modeling 封面图
Journal of Chemical Information and Modeling
IF:
5.3
论文数:
9.1K
被引数:
4.0W

机构

U
University of Sheffield
学者数:
3.0W
论文数: 2.9W
被引数: 3.9W
U
Universiti Teknologi Malaysia
学者数:
1.4W
论文数: 1.1W
被引数: 85
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