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Revealing Noncovalent Interactions

delete2010-04-15
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OA
AI
E
Erin R. Johnson
S
Shahar Keinan
P
Paula Mori‐Sánchez
J
Julia Contreras‐García
A
Aron J. Cohen
W
Weitao Yang *
DOI:10.1021/ja100936wdelete
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摘要

摘要

En 中文
Molecular structure does not easily identify the intricate noncovalent interactions that govern many areas of biology and chemistry, including design of new materials and drugs. We develop an approach to detect noncovalent interactions in real space, based on the electron density and its derivatives. Our approach reveals the underlying chemistry that compliments the covalent structure. It provides a rich representation of van der Waals interactions, hydrogen bonds, and steric repulsion in small molecules, molecular complexes, and solids. Most importantly, the method, requiring only knowledge of the atomic coordinates, is efficient and applicable to large systems, such as proteins or DNA. Across these applications, a view of nonbonded interactions emerges as continuous surfaces rather than close contacts between atom pairs, offering rich insight into the design of new and improved ligands.
Keyword:
SELF-DIRECTED GROWTH
ELECTRON-DENSITY
ENERGIES
ACCURATE
APPROXIMATIONS
LOCALIZATION
CONTACTS
BINDING
DESIGN
DIMER
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期刊

Journal of the American Chemical Society 封面图
Journal of the American Chemical Society
IF:
15.6
论文数:
20.0W
被引数:
60.2W

机构

D
Duke University
学者数:
6.3W
论文数: 5.7W
被引数: 6.5W
U
University of Cambridge
学者数:
7.7W
论文数: 7.1W
被引数: 13.7W
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