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A memetic algorithm for discovering negative correlation biclusters of DNA microarray data

delete2014-12-01
delete14
PRE
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W
Wassim Ayadi
J
Jin‐Kao Hao *
DOI:10.1016/j.neucom.2014.05.074delete
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Abstract

Abstract

En 中文
Most biclustering algorithms for microarrays data analysis focus on positive correlations of genes. However, recent studies demonstrate that groups of biologically significant genes can show negative correlations as well. So, discovering negatively correlated patterns from microarrays data represents a real need. In this paper, we propose a Memetic Biclustering Algorithm (MBA) which is able to detect negatively correlated biclusters. The performance of the method is evaluated based on two well-known microarray datasets (Yeast cell cycle and Saccharomyces cerevisiae), showing that MBA is able to obtain statistically and biologically significant biclusters. (C) 2014 Elsevier B.V. All rights reserved.
Keywords:
Biclustering
Microarrays data
Negative correlations
Memetic algorithm
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Journal

Neurocomputing cover
Neurocomputing
IF:
6.5
Papers:
2.5W
Citations:
6.5W

Organization

U
universite de tunis
Scholars:
1.1K
Papers: 987
Citations: 1