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A visual-language foundation model for computational pathology

delete2024-03-19
delete31
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OA
AI
M
Ming Y. Lu
B
Bowen Chen
D
Drew F. K. Williamson
R
Richard J. Chen
I
Ivy Liang
T
Tong Ding
G
Guillaume Jaume
I
Igor Odintsov
L
Long P. Le
G
Georg K. Gerber
A
Anil V. Parwani
A
Andrew Zhang
F
Faisal Mahmood *
DOI:10.1038/s41591-024-02856-4delete
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Abstract

Abstract

En 中文
The accelerated adoption of digital pathology and advances in deep learning have enabled the development of robust models for various pathology tasks across a diverse array of diseases and patient cohorts. However, model training is often difficult due to label scarcity in the medical domain, and a model's usage is limited by the specific task and disease for which it is trained. Additionally, most models in histopathology leverage only image data, a stark contrast to how humans teach each other and reason about histopathologic entities. We introduce CONtrastive learning from Captions for Histopathology (CONCH), a visual-language foundation model developed using diverse sources of histopathology images, biomedical text and, notably, over 1.17 million image-caption pairs through task-agnostic pretraining. Evaluated on a suite of 14 diverse benchmarks, CONCH can be transferred to a wide range of downstream tasks involving histopathology images and/or text, achieving state-of-the-art performance on histology image classification, segmentation, captioning, and text-to-image and image-to-text retrieval. CONCH represents a substantial leap over concurrent visual-language pretrained systems for histopathology, with the potential to directly facilitate a wide array of machine learning-based workflows requiring minimal or no further supervised fine-tuning. Developed using diverse sources of histopathology images, biomedical text and over 1.17 million image-caption pairs, evaluated on a suite of 14 diverse benchmarks, a visual-language foundation model achieves state-of-the-art performance on a wide array of clinically relevant pathology tasks.
Keywords:
ARTIFICIAL-INTELLIGENCE
CANCER
SYSTEM

Journal

Nature Medicine cover
Nature Medicine
IF:
50
Papers:
1.4W
Citations:
13.4W

Organization

H
Harvard University
Scholars:
26.5W
Papers: 22.0W
Citations: 28.7W