arrow
Return

Accelerating structure search using atomistic graph-based classifiers

delete2024-07-03
delete2
delete
OA
AI
A
Andreas Møller Slavensky
B
Bjørk Hammer *
DOI:10.1063/5.0207801delete
deleteOriginal
deleteShare
deleteSave
Abstract

Abstract

En 中文
We introduce an atomistic classifier based on a combination of spectral graph theory and a Voronoi tessellation method. This classifier allows for the discrimination between structures from different minima of a potential energy surface, making it a useful tool for sorting through large datasets of atomic systems. We incorporate the classifier as a filtering method in the Global Optimization with First-principles Energy Expressions (GOFEE) algorithm. Here, it is used to filter out structures from exploited regions of the potential energy landscape, whereby the risk of stagnation during the searches is lowered. We demonstrate the usefulness of the classifier by solving the global optimization problem of two-dimensional pyroxene, three-dimensional olivine, Au-12, and Lennard-Jones LJ(55) and LJ(75) nanoparticles.
Keywords:
GEOMETRY OPTIMIZATION
GLOBAL OPTIMIZATION
DATA-EFFICIENT
MACHINE
SURFACE
POTENTIALS
CLUSTERS
DATABASE
MINIMA
APPROXIMATION

Journal

Journal of Chemical Physics cover
Journal of Chemical Physics
IF:
3.1
Papers:
7.2W
Citations:
23.2W

Organization

A
Aarhus University
Scholars:
4.3W
Papers: 4.2W
Citations: 4.8W
Cited Papers

Cited Papers

Synthesis and structure of free-standing germanium quantum dots and their application in live cell imaging
err2015-01-01
err0
errOAAI
errAli Karatutlu; Mingying Song; Ann P. Wheeler; Osman Ersoy; William R. Little; Yuanpeng Zhang; Pascal Puech; Filippo S. Boi; Zofia Luklinska; Andrei V. Sapelkin
errShare
errSave
E(3)-equivariant graph neural networks for data-efficient and accurate interatomic potentials
err2022-05-04
err648
errOAAI
errBatzner, Simon; Musaelian, Albert; Sun, Lixin; Geiger, Mario; Mailoa, Jonathan P.; Kornbluth, Mordechai; Molinari, Nicola; Smidt, Tess E.; Kozinsky, Boris
errShare
errSave
Age- and sex-related variation of plasma endothelin-1 concentration in normal and hypertensive subjects
err1992-04-01
err0
PREAI
errTakashi Miyauchi; Masashi Yanagisawa; Kaname Iida; Ryuichi Ajisaka; Nobuhiro Suzuki; Masahiko Fujino; Katsutoshi Goto; Tomon Masaki; Yasuro Sugishita
errShare
errSave
Delay stability margins of linear plants
err2017-01-06
err0
PREAI
errA. S. Fursov; E. S. Sagadinova; H. Hongxiang
errShare
errSave
Less is more: Sampling chemical space with active learning
err2018-05-22
err571
errOAAI
errSmith, Justin S.; Nebgen, Ben; Lubbers, Nicholas; Isayev, Olexandr; Roitberg, Adrian E.
errShare
errSave
CHGNet as a pretrained universal neural network potential for charge-informed atomistic modelling
err2023-09-14
err152
errOAAI
errDeng, Bowen; Zhong, Peichen; Jun, KyuJung; Riebesell, Janosh; Han, Kevin; Bartel, Christopher J.; Ceder, Gerbrand
errShare
errSave
researcher View more