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Accelerating the density-functional tight-binding method using graphical processing units

delete2023-02-24
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OA
AI
V
Van‐Quan Vuong
C
Caterina Cevallos
B
B. Hourahine
B
Bálint Aradi
J
Jacek Jakowski
S
Stephan Irle *
C
Cristopher Camacho *
DOI:10.1063/5.0130797delete
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Abstract

Abstract

En 中文
Acceleration of the density-functional tight-binding (DFTB) method on single and multiple graphical processing units (GPUs) was accomplished using the MAGMA linear algebra library. Two major computational bottlenecks of DFTB ground-state calculations were addressed in our implementation: the Hamiltonian matrix diagonalization and the density matrix construction. The code was implemented and benchmarked on two different computer systems: (1) the SUMMIT IBM Power9 supercomputer at the Oak Ridge National Laboratory Leadership Computing Facility with 1-6 NVIDIA Volta V100 GPUs per computer node and (2) an in-house Intel Xeon computer with 1-2 NVIDIA Tesla P100 GPUs. The performance and parallel scalability were measured for three molecular models of 1-, 2-, and 3-dimensional chemical systems, represented by carbon nanotubes, covalent organic frameworks, and water clusters.
Keywords:
DIVIDE-AND-CONQUER
CHEMISTRY
CLUSTERS
PARALLEL
IMPLEMENTATION
SIMULATIONS
EIGENSOLVER
MOLECULES
EXPANSION
EXTENSION

Journal

Journal of Chemical Physics cover
Journal of Chemical Physics
IF:
3.1
Papers:
7.2W
Citations:
23.2W

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Universidad Costa Rica
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united states department of energy (doe)
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University of Tennessee System cover
University of Tennessee System
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University of Bremen
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