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Artificial intelligence in virtual screening: Models versus experiments

delete2022-07-01
delete30
PRE
AI
N
N. Arul Murugan *
G
Gnana Ruba Priya
G
G. Narahari Sastry
S
Stefano Markidis
DOI:10.1016/j.drudis.2022.05.013delete
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Abstract

Abstract

En 中文
A typical drug discovery project involves identifying active compounds with significant binding potential for selected disease-specific targets. Experimental high-throughput screening (HTS) is a traditional approach to drug discovery, but is expensive and time-consuming when dealing with huge chemical libraries with billions of compounds. The search space can be narrowed down with the use of reliable computational screening approaches. In this review, we focus on various machine-learning (ML) and deep-learning (DL)-based scoring functions developed for solving classification and ranking problems in drug discovery. We highlight studies in which ML and DL models were successfully deployed to identify lead compounds for which the experimental validations are available from bioassay studies.
Keywords:
Computational drug discovery
Scoring functions
Machine learning-based scoring
Binding affinity
Binding assay studies
Chemical spaces

Journal

Drug Discovery Today cover
Drug Discovery Today
IF:
7.5
Papers:
6.4K
Citations:
2.3W

Organization

R
Royal Institute of Technology
Scholars:
1.8W
Papers: 1.8W
Citations: 25
C
council of scientific & industrial research (csir) - india
Scholars:
4.7W
Papers: 3.9W
Citations: 37
I
Indraprastha Institute of Information Technology Delhi
Scholars:
933
Papers: 689
Citations: 558
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Cited Papers

Cited Papers

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SimBoost: a read-across approach for predicting drug-target binding affinities using gradient boosting machines
err2017-04-18
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errHe, Tong; Heidemeyer, Marten; Ban, Fuqiang; Cherkasov, Artem; Ester, Martin
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CSAR Data Set Release 2012: Ligands, Affinities, Complexes, and Docking Decoys
err2013-05-10
err99
errOAAI
errDunbar, James B., Jr.; Smith, Richard D.; Damm-Ganamet, Kelly L.; Ahmed, Aqeel; Esposito, Emilio Xavier; Delproposto, James; Chinnaswamy, Krishnapriya; Kang, You-Na; Kubish, Ginger; Gestwicki, Jason E.; Stuckey, Jeanne A.; Carlson, Heather A.
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