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Bis-Tetrazine Fluorogenic (Silicon)-Rhodamine Dyes for Live-Cell Labeling

delete2026-07-11
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OA
AI
S
Sabrina Giofrè
L
Lukas Schartel
R
Richard Wombacher
E
Edward A. Lemke *
DOI:10.1021/jacs.6c04723delete
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Abstract

Abstract

En 中文
Fluorogenic click dyes are valuable tools for biorthogonal labeling, enabling real-time visualization of biomolecules and cellular processes in their native environments. However, achieving efficient quenching and high fluorescence turn-on within a single dye scaffold remains a significant challenge. Herein, we report a class of fluorogenic click dyes based on a structural modification of (silicon)-rhodamines at the amino groups of the xanthene scaffold, resulting in a particularly short linker and a highly optimized quenched state. This modification enables the synthesis of both mono- and bis-functional derivatives. The monofunctional dyes are fully compatible with established click-labeling strategies and display exceptional fluorogenic responses, with fluorescence enhancements of up to 2 orders of magnitude. Notably, the bis-functional derivatives are fluorogenic dyes that exhibit fluorescence turn-on ratios approaching 3 orders of magnitude upon biorthogonal reaction, making them particularly suitable for live-cell applications. We show that the short bis-linker has high potential for anisotropy measurements that can report on protein size and dynamics. We further demonstrate the unique utility of these bis-functional dyes for peptide cyclization, enhancing cellular uptake while enabling real-time visualization. Together, this work introduces a versatile dye class that substantially expands the scope of click chemistry and will advance applications in live-cell imaging as well as studies of protein structure and dynamics.

Journal

Journal of the American Chemical Society cover
Journal of the American Chemical Society
IF:
15.6
Papers:
20.0W
Citations:
60.2W

Organization

M
Max Planck Institute for Medical Research
Scholars:
62
Papers: 23
Citations: 1.5K
J
johannes gutenberg university mainz
Scholars:
710
Papers: 266
Citations: 1
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