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BrainMap VBM: An environment for structural meta-analysis

delete2018-05-02
delete68
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OA
AI
T
Thomas J. Vanasse
P
P. Mickle Fox
D
Daniel S. Barron
M
Michaela Robertson
S
Simon B. Eickhoff
J
Jack L. Lancaster
P
Peter T. Fox *
DOI:10.1002/hbm.24078delete
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Abstract

Abstract

En 中文
The BrainMap database is a community resource that curates peer-reviewed, coordinate-based human neuroimaging literature. By pairing the results of neuroimaging studies with their relevant meta-data, BrainMap facilitates coordinate-based meta-analysis (CBMA) of the neuroimaging literature en masse or at the level of experimental paradigm, clinical disease, or anatomic location. Initially dedicated to the functional, task-activation literature, BrainMap is now expanding to include voxel-based morphometry (VBM) studies in a separate sector, titled: BrainMap VBM. VBM is a whole-brain, voxel-wise method that measures significant structural differences between or within groups which are reported as standardized, peak x-y-z coordinates. Here we describe BrainMap VBM, including the meta-data structure, current data volume, and automated reverse inference functions (region-to-disease profile) of this new community resource. CBMA offers a robust methodology for retaining true-positive and excluding false-positive findings across studies in the VBM literature. As with BrainMap's functional database, BrainMap VBM may be synthesized en masse or at the level of clinical disease or anatomic location. As a use-case scenario for BrainMap VBM, we illustrate a trans-diagnostic data-mining procedure wherein we explore the underlying network structure of 2,002 experiments representing over 53,000 subjects through independent components analysis (ICA). To reduce data-redundancy effects inherent to any database, we demonstrate two data-filtering approaches that proved helpful to ICA. Finally, we apply hierarchical clustering analysis (HCA) to measure network- and disease-specificity. This procedure distinguished psychiatric from neurological diseases. We invite the neuroscientific community to further exploit BrainMap VBM with other modeling approaches.
Keywords:
atrophy
data-mining
independent components analysis
networks
pattern analysis
structural covariance
structural magnetic resonance imaging
transdiagnostic
voxel-based morphometry
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Journal

Human Brain Mapping cover
Human Brain Mapping
IF:
3.3
Papers:
6.8K
Citations:
2.6W

Organization

U
US Department of Veterans Affairs
Scholars:
3.8W
Papers: 3.3W
Citations: 47
U
university of texas system
Scholars:
18.5W
Papers: 15.6W
Citations: 210
V
veterans health administration (vha)
Scholars:
2.6W
Papers: 2.1W
Citations: 40
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Cited Papers

Cited Papers

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errBarron, Daniel S.; Fox, P. Mickle; Laird, Angela R.; Robinson, Jennifer L.; Fox, Peter T.
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The hubs of the human connectome are generally implicated in the anatomy of brain disorders
errBRAIN
IF11.7
err2014-06-19
err899
errOAAI
errCrossley, Nicolas A.; Mechelli, Andrea; Scott, Jessica; Carletti, Francesco; Fox, Peter T.; McGuire, Philip; Bullmore, Edward T.
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Meta-Analysis of Gray Matter Anomalies in Schizophrenia: Application of Anatomic Likelihood Estimation and Network Analysis
err2008-11-01
err556
errOAAI
errGlahn, David C.; Laird, Angela R.; Ellison-Wright, Ian; Thelen, Sarah M.; Robinson, Jennifer L.; Lancaster, Jack L.; Bullmore, Edward T.; Fox, Peter T.
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Meta-Analysis in Human Neuroimaging: Computational Modeling of Large-Scale Databases
err2014-07-08
err146
errOAAI
errFox, Peter T.; Lancaster, Jack L.; Laird, Angela R.; Eickhoff, Simon B.
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Metaanalytic Connectivity Modeling: Delineating the Functional Connectivity of the Human Amygdala
err2009-07-14
err295
errOAAI
errRobinson, Jennifer L.; Laird, Angela R.; Glahn, David C.; Lovallo, William R.; Fox, Peter T.
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BrainMap taxonomy of experimental design: Description and evaluation
err2005-04-21
err92
errOAAI
errFox, PT; Laird, AR; Fox, SP; Fox, PM; Uecker, AM; Crank, M; Koenig, SF; Lancaster, JL
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Preparation of amorphous magnetite nanoparticles embedded in polyvinyl alcohol using ultrasound radiation
err2000-01-01
err0
PREAI
errR. Vijaya Kumar; Yu. Koltypin; Y. S. Cohen; Yair Cohen; D. Aurbach; O. Palchik; I. Felner; A. Gedanken
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