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Cancer progression modeling using static sample data
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DOI：10.1186/s13059-014-0440-0.png)
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Abstract
En 中文
As molecular profiling data continue to accumulate, the design of integrative computational analyses that can provide insights into the dynamic aspects of cancer progression becomes feasible. Here, we present a novel computational method for the construction of cancer progression models based on the analysis of static tumor samples. We demonstrate the reliability of the method with simulated data, and describe the application to breast cancer data. Our findings support a linear, branching model for breast cancer progression. An interactive model facilitates the identification of key molecular events in the advance of disease to malignancy.
Keywords:
BREAST-CANCER
GENE-EXPRESSION
SOMATIC MUTATIONS
HISTOLOGIC GRADE
PRINCIPAL CURVES
MESSENGER-RNA
OVEREXPRESSION
EVOLUTION
SURVIVAL
COMBINATION
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