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Constructing a global human epidemic database using open-source digital biosurveillance

delete2025-02-26
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OA
AI
R
Rinette Badker *
N
Naama Kipperman
B
Benjamin Ash
N
Nita Madhav
B
Ben Oppenheim
P
Patrick D. Savage
N
Nicole Stephenson
C
Chris Pardee
DOI:10.1038/s41597-025-04663-zdelete
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Abstract

Abstract

En 中文
We developed a dataset consisting of outbreak data collected from official, open-source surveillance reports representing more than 170 pathogens, 237 countries and territories, and more than 3300 events that occurred primarily between 1963 and 2023. Here we present and analyze a subset of these data, comprising a dataset of human epidemic events with onset between 2015 and 2020. Structuring of epidemiological data in the dataset follows a specific methodology to ensure consistency across all events. This methodology has been designed to produce the most reliable spatiotemporal view of an outbreak as possible. To ensure data are true-to-source, the structured data undergoes multiple rounds of both manual and automated review and validation. The extensive and standardized nature of the dataset makes it well-suited for both descriptive epidemiology and exploring outbreak dynamics and disease emergence.

Journal

Scientific Data cover
Scientific Data
IF:
6.9
Papers:
3.6K
Citations:
3.8W

Organization

No organization information available