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Deciphering cell-fate trajectories using spatiotemporal single-cell transcriptomic data

delete2025-12-04
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OA
AI
Z
Zhenyi Zhang
Z
Zihan Wang
Y
Yuhao Sun
J
Jiantao Shen
Q
Qiangwei Peng
李铁军 (Tiejun Li)
P
Peijie Zhou
DOI:10.1038/s41540-025-00624-9delete
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Abstract

Abstract

En 中文
Cellular processes evolve dynamically across time and space. Single-cell and spatial omics technologies have provided high-resolution snapshots of gene expression, greatly expanding the capability to characterize cellular states. This review summarizes recent modeling strategies for time-series and spatiotemporal transcriptomic data, emphasizing links between dynamical systems, generative modeling, and biological insight. These approaches illustrate how computational tools can deepen our understanding of the dynamic nature of single cells.
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Journal

N
npj Systems Biology and Applications
IF:
3.5
Papers:
831
Citations:
1.3K

Organization

C
Center for Quantitative Biology
Scholars:
9
Papers: 6
Citations: 0
L
lmam and school of mathematical sciences
Scholars:
3
Papers: 1
Citations: 0
C
center for machine learning research
Scholars:
2
Papers: 1
Citations: 0
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