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Engineering a phi15-based expression system for stringent gene expression in Pseudomonas putida

delete2025-02-04
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E
Eveline‐Marie Lammens
D
Daniel C. Volke
A
Alison Kerremans
Y
Yannick Aerts
M
Maarten Boon
P
Pablo I. Nikel
R
Rob Lavigne *
DOI:10.1038/s42003-025-07508-ydelete
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Abstract

Abstract

En 中文
The T7 phage RNA polymerase (RNAP) is a widely used expression platform, but its implementation in non-model microbial hosts poses significant challenges due to cytotoxicity. We constructed an optimized phage phi15-based expression system as alternative to the T7 platform for a wide range of applications in Pseudomonas putida. The new system employs the small phi15 RNAP, driving expression from an orthogonal phi15 promoter. By finetuning expression levels of phi15rnap and introducing a phi15 lysozyme mutant that inhibits phi15 RNAP in uninduced conditions, a stringent system was created with 200-fold inducibility. Moreover, by successfully decoupling cell growth and protein production using phi15 gp16, a host RNAP inhibitor, expression levels could be enhanced further (20%). Apart from creating four optimized platform P. putida hosts and a set of Golden Gate-compatible vectors, we demonstrate the extensive flexibility of the phi15 system. A proof-of-concept expression for industrially relevant fluorinase resulted in 2.5- and 5-fold increased yield compared to other widely-adopted expression systems. The system functions well in combination with several inducer systems, and in a variety of vector-based and genomically integrated set-ups. In conclusion, the phi15 RNAP, promoter, lysozyme and growth-decoupler provide a valuable plug-and-play set of genetic parts for the P. putida toolbox.
Keywords:
ESCHERICHIA-COLI
RNA
TRANSCRIPTION
PRECISE
VECTORS
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Journal

Communications Biology cover
Communications Biology
IF:
5.1
Papers:
1.0W
Citations:
3.2W

Organization

T
technical university of denmark
Scholars:
2.6W
Papers: 2.8W
Citations: 37
K
KU Leuven
Scholars:
5.7W
Papers: 5.2W
Citations: 8.1W