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Engineering G-quadruplex aptamer to modulate its binding specificity

delete2020-08-31
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OA
AI
L
Long Li
S
Shujuan Xu
X
Xueyu Peng
Y
Yuzhuo Ji
Y
Yan He
C
Cheng Cui
X
Xiaowei Li
X
Xiaoshu Pan
L
Lu Yang
邱丽萍 (Liping Qiu)
蒋健晖 cover
蒋健晖 (Jian‐Hui Jiang)
谭蔚泓 cover
谭蔚泓 (Weihong Tan) *
DOI:10.1093/nsr/nwaa202delete
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Abstract

Abstract

En 中文
The use of aptamers in bio analytical and biomedical applications exploits their ability to recognize cell surface protein receptors. Targeted therapeutics and theranostics come to mind in this regard. However, protein receptors occur on both cancer and normal cells; as such, aptamers are now taxed with identifying high vs. low levels of protein expression. Inspired by the flexible template mechanism and elegant control of natural nucleic acid-based structures, we report an allosteric regulation strategy for constructing a structure-switching aptamer for enhanced target cell recognition by engineering aptamers with DNA intercalated motifs (i-motifs) responsive to the microenvironment, such as pH. Structure-switching sensitivity can be readily tuned by manipulating i-motif sequences. However, structure-switching sensitivity is difficult to estimate, making it equally difficult to effectively screen modified aptamers with the desired sensitivity. To address this problem, we selected a fluorescent probe capable of detecting G-quadruplex in complicated biological media.
Keywords:
G-quadruplex
aptamer
i-motif
binding specificity
cell microenvironment
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Journal

National Science Review cover
National Science Review
IF:
17.1
Papers:
3.6K
Citations:
2.0W

Organization

State University System of Florida cover
State University System of Florida
Scholars:
12.7W
Papers: 10.9W
Citations: 130