arrow
Return

Engineering NIR-sighted bacteria

delete2025-11-03
delete1
PRE
AI
S
Stefanie Meier
M
Michael Hörzing
C
Cornelia Böhm
E
Emma LR Düthorn
H
Heikki Takala
R
René Uebe
A
Andreas Möglich *
DOI:10.7554/eLife.107069delete
deleteOriginal
deleteOriginal request for help
deleteShare
deleteSave
Abstract

Abstract

En 中文
Spatially and temporally orchestrated gene expression underpins organismal development, physiology, and adaptation. In bacteria, two-component systems (TCS) translate environmental cues into inducible expression outputs. Inducible expression also serves as a versatile instrument in both basic and applied science. Here, we harness the photosensors of rhizobial bathy-phytochromes to construct synthetic TCSs for stringent activation of gene expression by near-infrared (NIR) light in laboratory and probiotic Escherichia coli strains, and in Agrobacterium tumefaciens. Orthogonal TCSs afford the multiplexed expression control of several genes by NIR and visible light. Notwithstanding substantial photochemical activation of bathy-phytochromes by visible radiation, the NIR-light-responsive systems hardly responded to red light. Evidently, light signals can be processed by TCSs into highly nonlinear responses at the physiologically relevant level of gene expression. These fundamental aspects likely extend to naturally occurring TCSs. Depending on their photosensor traits and environmental conditions, bathy-phytochromes may thus either be NIR-specific or function as colorblind receptors of light vs. darkness.
Keywords:
bacterial phytochrome
gene expression
near-infrared light
optogenetics
sensor histidine kinase
two-component system

Journal

eLife cover
eLife
IF:
0
Papers:
1.8W
Citations:
16

Organization

U
University of Bayreuth
Scholars:
7.4K
Papers: 6.7K
Citations: 1.2W
U
university of jyvaskyla
Scholars:
6.3K
Papers: 6.8K
Citations: 12
Cited Papers

Cited Papers

Leveraging the histidine kinase-phosphatase duality to sculpt two-component signaling
err2024-06-10
err1
errOAAI
errMeier, Stefanie S. M.; Multamaki, Elina; Ranzani, Americo T.; Takala, Heikki; Moeglich, Andreas
errShare
errSave
Neurotrophin receptor tyrosine kinases regulated with near-infrared light
err2019-03-08
err53
errOAAI
errLeopold, Anna V.; Chernov, Konstantin G.; Shemetov, Anton A.; Verkhusha, Vladislav V.
errShare
errSave
A protonation-coupled feedback mechanism controls the signalling process in bathy phytochromes
err2015-04-13
err78
PREAI
errEscobar, Francisco Velazquez; Piwowarski, Patrick; Salewski, Johannes; Michael, Norbert; Lopez, Maria Fernandez; Rupp, Anna; Qureshi, Bilal Muhammad; Scheerer, Patrick; Bartl, Franz; Frankenberg-Dinkel, Nicole; Siebert, Friedrich; Mroginski, Maria Andrea; Hildebrandt, Peter
errShare
errSave
Optogenetic control of gut bacterial metabolism to promote longevity
err2020-12-16
err57
errOAAI
errHartsough, Lucas A.; Park, Mooncheol; Kotlajich, Matthew, V; Lazar, John Tyler; Han, Bing; Lin, Chih-Chun J.; Musteata, Elena; Gambill, Lauren; Wang, Meng C.; Tabor, Jeffrey J.
errShare
errSave
Darkness inhibits autokinase activity of bacterial bathy phytochromes
err2024-04-01
err2
errOAAI
errHuber, Christina; Strack, Merle; Schultheiss, Isabel; Pielage, Julia; Mechler, Xenia; Hornbogen, Justin; Diller, Rolf; Frankenberg-Dinkel, Nicole
errShare
errSave
InterPro: the protein sequence classification resource in 2025
err2024-11-20
err50
errOAAI
errFlorentino, Laise Cavalcanti; Chuguransky, Sara Rocio; Grego, Tiago; Pinto, Beatriz Lazaro; Orr, Ailsa; Paysan-Lafosse, Typhaine; Ponamareva, Irina; Salazar, Gustavo A.; Bork, Peer; Colwell, Lucy; Gough, Julian; Haft, Daniel H.; Letunic, Ivica; Llinares-Lopez, Felipe; Marchler-Bauer, Aron; Meng-Papaxanthos, Laetitia; Mi, Huaiyu; Natale, Darren A.; Orengo, Christine A.; Pandurangan, Arun P.; Piovesan, Damiano; Rivoire, Catherine; Sigrist, Christian J. A.; Thanki, Narmada; Thibaud-Nissen, Francoise; Thomas, Paul D.; Tosatto, Silvio C. E.; Wu, Cathy H.; Bateman, Alex
errShare
errSave
Engineering bacterial thiosulfate and tetrathionate sensors for detecting gut inflammation
err2017-04-03
err227
errOAAI
errDaeffler, Kristina N-M; Galley, Jeffrey D.; Sheth, Ravi U.; Ortiz-Velez, Laura C.; Bibb, Christopher O.; Shroyer, Noah F.; Britton, Robert A.; Tabor, Jeffrey J.
errShare
errSave
From Dusk till Dawn: One-Plasmid Systems for Light-Regulated Gene Expression
err2012-03-01
err0
PREAI
errRobert Ohlendorf; Roee R. Vidavski; Avigdor Eldar; Keith Moffat; Andreas Möglich
errShare
errSave
Traits of Bathy Phytochromes and Application to Bacterial Optogenetics
err2025-07-11
err0
errOAAI
errCornelia Böhm; Kimmo Lehtinen; Elina Multamäki; Roosa Vanhatalo; Oscar Brander; Stefanie S. M. Meier; Jessica Rumfeldt; Andreas Möglich; Heikki Takala
errShare
errSave
researcher View more