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Expanded iOn switch toolkit enables flexible clonal labeling and dynamic imaging in model and non-model animals

delete2026-03-24
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OA
AI
Z
Zi Chao Ngiam
K
Kyosuke Wada
J
Jun Hatakeyama
Y
Yuki Y. Yamauchi
T
Takuya Kaneko
P
Pauline Rouillard
H
Haruka Sato
M
Masahiko Hibi
I
Ikuo Suzuki
C
Carina Hanashima
C
Chiaki Ohtaka‐Maruyama
T
Takuma Kumamoto *
DOI:10.1038/s42003-026-09907-1delete
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Abstract

Abstract

En 中文
Understanding how neural progenitors generate diverse neuronal subtypes is central to developmental and evolutionary neuroscience. Lineage tracing is a key tool for dissecting these processes, but existing methods are often constrained by stochastic expression, recombination bias, or reliance on transgenic models—limitations that restrict their application in non-model organisms. Here, we present an enhanced iOn switch system optimized for evo-devo research. Leveraging its modular, integration-based transgene expression logic, we developed a tunable labeling strategy that enables both sparse and dense labeling within a single framework. We further expanded the system’s fluorescent palette and introduced subcellular targeting options to support multiclonal analysis and stable time-lapse imaging. Finally, we demonstrate the versatility of this approach across a wide range of vertebrate species, including mouse, guinea pig, rat, chick, turtle, and zebrafish, thereby establishing the iOn switch system as a flexible and accessible tool for evo-devo research. The expanded iOn switch toolkit enables multicolor labelling, clonal lineage tracing, and long-term imaging across diverse vertebrate species, enabling evolutionary developmental research.
Keywords:
Developmental neurogenesis
Evolutionary developmental biology
Life Sciences
general
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Communications Biology cover
Communications Biology
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5.1
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U
University of Tokyo
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Nagoya University
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waseda university
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Chuo University
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Tokyo Metropolitan Institute of Medical Science
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