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Fast Bayesian Functional Principal Components Analysis

delete2025-12-01
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PRE
AI
J
Joseph Sartini *
X
Xinkai Zhou
E
Elizabeth Selvin
S
Scott L. Zeger
C
Ciprian M. Crainiceanu
DOI:10.1080/10618600.2025.2592768delete
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Abstract

Abstract

En 中文
Functional Principal Components Analysis (FPCA) is a widely used analytic tool for dimension reduction of functional data. Traditional implementations of FPCA estimate the principal components from the data, then treat these estimates as fixed in subsequent analyses. To account for the uncertainty of PC estimates, we propose FAST, a fully-Bayesian FPCA with three core components: (1) projection of eigenfunctions onto an orthonormal spline basis; (2) efficient sampling of the orthonormal spline coefficient matrix using a parameter expansion scheme based on polar decomposition; and (3) ordering eigenvalues during sampling. Extensive simulation studies show that FAST is very stable and performs better compared to existing methods. FAST is motivated by and applied to a study of the variability in mealtime glucose from the Dietary Approaches to Stop Hypertension for Diabetes Continuous Glucose Monitoring (DASH4D CGM) study. All relevant STAN code and simulation routines are available as supplementary material.
Keywords:
Bayesian methods
Functional data
Semiparametric methods
Uncertainty quantification

Journal

J
Journal of Computational and Graphical Statistics
IF:
1.8
Papers:
141
Citations:
6.4K

Organization

J
johns hopkins university
Scholars:
1.1W
Papers: 4.1K
Citations: 1
Cited Papers

Cited Papers

Robust Bayesian functional principal component analysis
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Determination of Postprandial Glycemic Responses by Continuous Glucose Monitoring in a Real-World Setting
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errRoehling, Martin; Martin, Tobias; Wonnemann, Meinolf; Kragl, Martin; Klein, Horst Harald; Heinemann, Lutz; Martin, Stephan; Kempf, Kerstin
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Functional mixed effects models
err2012-08-24
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errZiyue Liu; Wensheng Guo
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Design of the Continuous Glucose Monitoring (CGM) Study in the Dietary Approaches to Stop Hypertension for Diabetes Trial (DASH4D-CGM)
err2025-04-01
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PREAI
errWang,Dan; Mu,Scott Z.; Tang,Olive; Echouffo-Tcheugui,Justin B.; Mitchell,Christine M.; Fang,Michael; Rooney,Mary R.; Yeh,Hsin-Chieh; Rebholz,Casey M.; Pilla,Scott J.; Appel,Lawrence J.; Selvin,Elizabeth
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Generalized Multilevel Function-on-Scalar Regression and Principal Component Analysis
err2015-01-25
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errOAAI
errJeff Goldsmith; Vadim Zipunnikov; Jennifer Schrack
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Functional Data Analysis with R
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IF0
err2024-02-13
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PREAI
errCiprian M. Crainiceanu; Jeff Goldsmith; Andrew Leroux; Erjia Cui
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Fast covariance estimation for high-dimensional functional data
err2014-06-27
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errOAAI
errLuo Xiao; Vadim Zipunnikov; David Ruppert; Ciprian Crainiceanu
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Longitudinal functional principal component analysis
err2010-01-01
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errOAAI
errSonja Greven; Ciprian Crainiceanu; Brian Caffo; Daniel Reich
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