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In vivo genome-wide CRISPR screens of human T cells in solid tumours

delete2026-08-12
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PRE
AI
Q
Qi Liu *
P
Peixin Amy Chen
E
Esha Urs
S
Shimin Zhang
M
Maya M. Arce
C
Charlotte H. Wang
J
Jun Yan
V
Vinh Q. Nguyen
Z
Zhongmei Li
J
Jin Seo
N
Nupura Kale
F
Fanglue Peng
Y
Yikai Luo
L
Laine Goudy
T
Taylor N. LaFlam
H
Haixia Zhong
C
Chandrima Modak
E
Emma Dann
J
Jae Hyung Jung
A
Amanda Kirane
A
Allison Betof Warner
B
Boi Bryant Quach
Z
Zinaida Good
B
Brian R. Shy
E
Eric Shifrut
S
Sagar P. Bapat
G
Greg M. Allen
J
Justin Eyquem
K
Katherine C. Fuh
S
Stacie E. Dodgson
J
Jason G. Cyster
A
Alexander Marson
J
Julia Carnevale *
DOI:10.1038/s41586-026-10906-9delete
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Abstract

Abstract

En 中文
Large-scale CRISPR screening in human T cells holds significant promise for identifying genetic modifications that enhance cellular immunotherapy. Yet, many regulators of T cell performance in solid tumours are not revealed in vitro1,2. In vivo screening in tumour-bearing mice is more physiological but has been limited by low intratumoural T cell recovery. Here we developed an in vivo model that efficiently recovers human T cells from solid tumours, permitting genome-wide CRISPR screens with few mice. Tumour-infiltrating T cells from this model exhibit hallmarks of dysfunction compared with splenic T cells, creating an ideal screening context. We performed two genome-wide CRISPR knockout screens to identify regulators of intratumoural T cell abundance and effector function. The abundance screen revealed the P2RY8–Gα13 GPCR signalling axis as a negative regulator of T cell tumour infiltration. The effector function screen identified GNAS as a key driver of T cell dysfunction in tumours, whose product, Gαs, acts as a convergent node downstream of multiple GPCRs sensing distinct suppressive ligands. Knockout of GNAS rendered T cells resistant to multiple suppressive cues and significantly improved efficacy across diverse solid tumour models in chimeric antigen receptor (CAR) and T cell receptor (TCR) systems. Combinatorial knockout of P2RY8–GNAS further enhanced tumour control, demonstrating that complementary in vivo screens can identify orthogonal targets whose combined editing improves therapeutic potency. This flexible, scalable platform can be adapted for systematic discovery of genetic strategies to improve solid tumour T cell therapies. An in vivo model that is able to recover human T cells from solid tumours can identify targets to help improve CAR T cell antitumour activity.

Journal

Nature cover
Nature
IF:
48.5
Papers:
1.7W
Citations:
96.5W

Organization

S
stanford university and university of california
Scholars:
2
Papers: 1
Citations: 0
U
university of california san francisco
Scholars:
5.2W
Papers: 4.0W
Citations: 66
G
Gladstone-UCSF Institute of Genomic Immunology
Scholars:
24
Papers: 5
Citations: 0
T
tel aviv university
Scholars:
4.8K
Papers: 1.8K
Citations: 1
S
stanford university
Scholars:
9.2K
Papers: 3.6K
Citations: 0
S
stanford university school of medicine
Scholars:
585
Papers: 182
Citations: 0
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