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Interoperable workflows by exchanging grid-based data between quantum-chemical program packages

delete2024-04-30
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OA
AI
K
Kevin Focke
M
Matteo De Santis
M
Mario Wolter
J
J. B.
V
Valérie Vallet
A
André Severo Pereira Gomes
M
Małgorzata Olejniczak
C
Christoph R. Jacob *
DOI:10.1063/5.0201701delete
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Abstract

Abstract

En 中文
Quantum-chemical subsystem and embedding methods require complex workflows that may involve multiple quantum-chemical program packages. Moreover, such workflows require the exchange of voluminous data that go beyond simple quantities, such as molecular structures and energies. Here, we describe our approach for addressing this interoperability challenge by exchanging electron densities and embedding potentials as grid-based data. We describe the approach that we have implemented to this end in a dedicated code, PyEmbed, currently part of a Python scripting framework. We discuss how it has facilitated the development of quantum-chemical subsystem and embedding methods and highlight several applications that have been enabled by PyEmbed, including wave-function theory (WFT) in density-functional theory (DFT) embedding schemes mixing non-relativistic and relativistic electronic structure methods, real-time time-dependent DFT-in-DFT approaches, the density-based many-body expansion, and workflows including real-space data analysis and visualization. Our approach demonstrates, in particular, the merits of exchanging (complex) grid-based data and, in general, the potential of modular software development in quantum chemistry, which hinges upon libraries that facilitate interoperability. (c) 2024 Author(s). All article content, except where otherwise noted, is licensed under a Creative Commons Attribution (CC BY) license(https://creativecommons.org/licenses/by/4.0/).
Keywords:
MOLECULAR-STRUCTURE
EMBEDDING METHODS
SOFTWARE NEWS
CHEMISTRY
EXPLORATION
SIMULATIONS
EXCITATIONS
PERSPECTIVE
MODELS

Journal

Journal of Chemical Physics cover
Journal of Chemical Physics
IF:
3.1
Papers:
7.2W
Citations:
23.2W

Organization

C
centre national de la recherche scientifique (cnrs)
Scholars:
24.5W
Papers: 18.2W
Citations: 279
B
Braunschweig University of Technology
Scholars:
7.7K
Papers: 6.6K
Citations: 19
R
rutgers university system
Scholars:
4.1W
Papers: 3.7W
Citations: 53
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