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Likelihood-Based Adaptive Learning in Stochastic State-Based Models

delete2019-07-01
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PRE
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P
Peter Vieting
R
Rodrigo C. de Lamare
L
Lukas Märtin
G
Guido Dartmann *
A
Anke Schmeink *
DOI:10.1109/LSP.2019.2917495delete
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Abstract

Abstract

En 中文
This letter presents an adaptive learning framework for estimating structural parameters in stochastic state-based models (SSMs). SSMs are a useful modeling tool in systems biology and medicine. While models in these disciplines are traditionally hand-crafted, an automated generation based on experimental data becomes a topic of research interest. In particular, our goal is to classify measured processes using the generated models. An innovative likelihood-based adaptive learning approach capable of learning the structural parameters, i.e., the arc weights of SSMs from data and exploiting the reliability of detected inputs is presented in this letter. Its convergence behavior is analyzed and an expression for the error at steady state is derived. Simulations assess the performance of the proposed and existing algorithms for a gene regulatory network.
Keywords:
Bioinformatics and genomics
statistical learning
adaptive signal processing
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Journal

IEEE Signal Processing Magazine cover
IEEE Signal Processing Magazine
IF:
9.6
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Citations:
1.7W

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RWTH Aachen University
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RWTH Aachen University Hospital
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pontificia universidade catolica do rio de janeiro
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