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Microbial Taxonomy Run Amok

delete2021-05-01
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R
Robert A. Sanford *
K
Karen G. Lloyd
K
Konstantinos T. Konstantinidis
F
Frank E. Löffler *
DOI:10.1016/j.tim.2020.12.010delete
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Abstract

Abstract

En 中文
DNA sequencing has led to an explosion in discovery of microbial phylogenetic novelty, especially that represented by uncultivated taxa, to which the traditional system of prokaryotic taxonomy has not adapted. A lack of expansion of the International Code of Nomenclature of Prokaryotes (ICNP, 'the Code') to effectively capture this information has created a 'wild west' situation where names are published or appear in popular reference databases without further verification or validation. The rapid propagation of variant and questionable naming methods has led to widespread confusion and undermines prior accomplishments. We exemplify inconsistencies that have arisen from this practice and endanger the interoperability of scientific findings. The immediate solution to this problem is to develop and adopt universal best practices that are accepted by expert researchers, major publishers, the International Committee on Systematics of Prokaryotes (ICSP), and international microbiological societies.
Keywords:
BACTERIA
RECLASSIFICATION
NOMENCLATURE
PROKARYOTES
GEOBACTER
DATABASE
PROPOSAL
NAMES
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Journal

Trends in Microbiology cover
Trends in Microbiology
IF:
14.9
Papers:
3.9K
Citations:
1.9W

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University of Illinois Urbana-Champaign
Scholars:
2.4W
Papers: 2.0W
Citations: 35
University of Tennessee System cover
University of Tennessee System
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2.9W
Papers: 2.6W
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University of Illinois System cover
University of Illinois System
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