arrow
Return

Missing Data Methods in Mendelian Randomization Studies With Multiple Instruments

delete2011-09-30
delete13
delete
OA
AI
S
Stephen Burgess *
S
Shaun R. Seaman
D
Debbie A. Lawlor
J
J. P. Casas
S
Simon G. Thompson
DOI:10.1093/aje/kwr235delete
deleteOriginal
deleteShare
deleteSave
View PDF
Abstract

Abstract

En 中文
Mendelian randomization studies typically have low power. Where there are several valid candidate genetic instruments, precision can be gained by using all the instruments available. However, sporadically missing genetic data can offset this gain. The authors describe 4 Bayesian methods for imputing the missing data based on a missing-at-random assumption: multiple imputations, single nucleotide polymorphism (SNP) imputation, latent variables, and haplotype imputation. These methods are demonstrated in a simulation study and then applied to estimate the causal relation between C-reactive protein and each of fibrinogen and coronary heart disease, based on 3 SNPs in British Women's Heart and Health Study participants assessed at baseline between May 1999 and June 2000. A complete-case analysis based on all 3 SNPs was found to be more precise than analyses using any 1 SNP alone. Precision is further improved by using any of the 4 proposed missing data methods; the improvement is equivalent to about a 25% increase in sample size. All methods gave similar results, which were apparently not overly sensitive to violation of the missing-at-random assumption. Programming code for the analyses presented is available online.
Keywords:
Bayesian methods
causal inference
imputation
instrumental variables
Mendelian randomization analysis
missing data
AI Summary

AI Summary

Key information extracted from the uploaded paper, including a brief overview, abstract, background, key highlights, visual analysis, and future outlook.

Journal

American Journal of Epidemiology cover
American Journal of Epidemiology
IF:
4.8
Papers:
10.0K
Citations:
3.7W

Organization

M
MRC Biostatistics Unit
Scholars:
775
Papers: 788
Citations: 3.6K
U
University of Cambridge
Scholars:
7.7W
Papers: 7.1W
Citations: 13.7W
U
university of london
Scholars:
21.5W
Papers: 19.7W
Citations: 305
U
University of Bristol
Scholars:
3.1W
Papers: 3.0W
Citations: 5.3W
researcher View more organizations
Cited Papers

Cited Papers

Implementation of coastal erosion management in the Netherlands
err2011-12-01
err0
PREAI
errJan P.M. Mulder; Saskia Hommes; Erik M. Horstman
errShare
errSave
Collaborative pooled analysis of data on C-reactive protein gene variants and coronary disease: judging causality by Mendelian randomisation
err2008-04-19
err47
PREAI
errDanesh, J.; CRP CHD Genet Collaborat; Hingorani, A.; Wensley, F.; Casas, J. P.; Smeeth, L.; Samani, N.J.; Hall, A.; Whincup, P.; Morris, R.; Lawlor, D.A.; Smith, G. Davey; Timpson, N.; Ebrahim, S.; Brown, M.; Sandhu, M.; Reiner, A.; Psaty, B.; Lange, L.; Cushman, M.; Tracy, R.; Nordestgaard, B.G.; Tybjaerg-Hansen, A.; Zacho, J.; Hung, J.; Thompson, P.; Beilby, J.; Palmer, L.J.; Fowkes, G.; Lowe, G.; Tzoulaki, I.; Kumari, M.; Overvad, K.; Khaw, K.T.; Benjamin, E.J.; Larson, M.G.; Yamamoto, J.F.; Chiodini, B.; Franzosi, M.; Norman, P.E.; Hankey, G.J.; Jamrozik, K.; Palmer, L.; Rimm, E.; Pai, J.; Heckbert, S.; Bis, J.; Yusuf, S.; Anand, S.; Engert, J.; Collins, R.; Melander, O.; Berglund, G.; Ladenvall, P.; Johansson, L.; Jansson, J.H.; Hallmans, G.; Humphries, S.; Manson, J.; Saleheen, D.; Frossard, P.; Sattar, N.; Robertson, M.; Shepherd, J.; Schaefer, E.; Hofman, A.; Witteman, J.C.M.; Kardys, I.; de Faire, U.; Bennet, A.; O'Reilly, D.; McMahon, A.; Packard, C.; Clarke, R.; Greenland, P.; Casas, J.P.; Smeeth, L.; Bowden, J.; Di Angelantonio, E.; Shah, T.; Verzilli, C.; Walker, M.; Wittaker, J.
errShare
errSave
The Effect of Therapy on Mature Height in Congenital Adrenal Hyperplasia*
err1978-12-01
err0
errOAAI
errREBECCA T. KIRKLAND; BRUCE S. KEENAN; JOHN H. HOLCOMBE; J. L. KIRKLAND; GEORGE W. CLAYTON
errShare
errSave
Magnetic and catalytic properties of inverse spinel CuFe2O4 nanoparticles
err2017-06-01
err0
PREAI
errS. Anandan; T. Selvamani; G. Guru Prasad; A. M. Asiri; J. J. Wu
errShare
errSave
errShare
errSave
researcher View more