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Optimization-based simultaneous alignment and reconstruction in multi-element tomography

delete2019-08-26
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OA
AI
Z
Zichao Wendy Di *
S
Si Chen
D
Doğa Gürsoy
T
Tatjana Paunesku
S
Sven Leyffer
S
Stefan M. Wild
S
Stefan Vogt
DOI:10.1364/OL.44.004331delete
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Abstract

Abstract

En 中文
As x-ray microscopy is pushed into the nanoscale with the advent of more bright and coherent x-ray sources, associated improvement in spatial resolution becomes highly vulnerable to geometrical errors and uncertainties during data collection. We address a form of error in tomography experiments, namely, the drift between projections during the tomographic scan. Our proposed method can simultaneously recover the drift, while tomographically reconstructing the specimen based on a joint iterative optimization scheme. This approach utilizes the correlation provided from different view angles and different signals. While generally applicable, we demonstrate our method on x-ray fluorescence tomography from a tissue specimen and compare the reconstruction quality with conventional methods. (C) 2019 Optical Society of America
Keywords:
X-RAY NANOTOMOGRAPHY
REGISTRATION

Journal

Optics Letters cover
Optics Letters
IF:
3.3
Papers:
4.0W
Citations:
7.6W

Organization

A
Argonne National Laboratory
Scholars:
1.1W
Papers: 9.2K
Citations: 3.8W
U
united states department of energy (doe)
Scholars:
11.3W
Papers: 9.6W
Citations: 246
Cited Papers

Cited Papers

X-ray fluorescence microprobe imaging in biology and medicine
err2006-09-27
err229
errOAAI
errPaunesku, Tatjana; Vogt, Stefan; Maser, Jorg; Lai, Barry; Woloschak, Gayle
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err
IF0
err
err0
PREAI
err
errShare
errSave
Analytical registration of vertical image drifts in parallel beam tomographic data
err2017-11-28
err3
errOAAI
errStorm, Malte; Beckmann, Felix; Rau, Christoph
errShare
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Quantitative interior x-ray nanotomography by a hybrid imaging technique
errOPTICA
IF8.5
err2015-03-19
err63
errOAAI
errGuizar-Sicairos, Manuel; Boon, Jaap J.; Mader, Kevin; Diaz, Ana; Menzel, Andreas; Bunk, Oliver
errShare
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A novel fully automatic scheme for fiducial marker-based alignment in electron tomography
err2015-12-01
err42
PREAI
errHan, Renmin; Wang, Liansan; Liu, Zhiyong; Sun, Fei; Zhang, Fa
errShare
errSave
Automatic projection image registration for nanoscale X-ray tomographic reconstruction
err2018-10-23
err25
PREAI
errYu, Haiyan; Xia, Sihao; Wei, Chenxi; Mao, Yuwei; Larsson, Daniel; Xiao, Xianghui; Pianetta, Piero; Yu, Young-Sang; Liu, Yijin
errShare
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