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Probabilistic learning for pulsar classification

delete2022-10-06
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Sambatra Andrianomena *
DOI:10.1088/1475-7516/2022/10/016delete
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Abstract

Abstract

En 中文
In this work, we explore the possibility of using probabilistic learning to identify pulsar candidates. We make use of Deep Gaussian Process (DGP) and Deep Kernel Learning (DKL). Trained on a balanced training set in order to avoid the effect of class imbalance, the performance of the models, achieving relatively high probability of differentiating the positive class from the negative one (roc-auc similar to 0.98), is very promising overall. We estimate the predictive entropy of each model predictions and find that DKL is more confident than DGP in its predictions and provides better uncertainty calibration. Upon investigating the effect of training with imbalanced dataset on the models, results show that each model performance decreases with an increasing number of the majority class in the training set. Interestingly, with a number of negative class 10x that of positive class, the models still provide reasonably well calibrated uncertainty, i.e. an expected Uncertainty Calibration Error (UCE) less than 6%. We also show in this study how, in the case of relatively small amount of training dataset, a convolutional neural network based classifier trained via Bayesian Active Learning by Disagreement (BALD) performs. We find that, with an optimized number of training examples, the model - being the most confident in its predictions - generalizes relatively well and produces the best uncertainty calibration which corresponds to UCE = 3.118%.
Keywords:
Bayesian reasoning
Machine learning
radio pulsars

Journal

Journal of Cosmology and Astroparticle Physics cover
Journal of Cosmology and Astroparticle Physics
IF:
5.9
Papers:
1.3W
Citations:
4.7W

Organization

U
University of the Western Cape
Scholars:
4.0K
Papers: 3.7K
Citations: 11
Cited Papers

Cited Papers

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errArzoumanian, Z.; Baker, P. T.; Brazier, A.; Burke-Spolaor, S.; Chamberlin, S. J.; Chatterjee, S.; Christy, B.; Cordes, J. M.; Cornish, N. J.; Crawford, F.; Cromartie, H. Thankful; Crowter, K.; DeCesar, M.; Demorest, P. B.; Dolch, T.; Ellis, J. A.; Ferdman, R. D.; Ferrara, E.; Folkner, W. M.; Fonseca, E.; Garver-Daniels, N.; Gentile, P. A.; Haas, R.; Hazboun, J. S.; Huerta, E. A.; Islo, K.; Jones, G.; Jones, M. L.; Kaplan, D. L.; Kaspi, V. M.; Lam, M. T.; Lazio, T. J. W.; Levin, L.; Lommen, A. N.; Lorimer, D. R.; Luo, J.; Lynch, R. S.; Madison, D. R.; McLaughlin, M. A.; McWilliams, S. T.; Mingarelli, C. M. F.; Ng, C.; Nice, D. J.; Park, R. S.; Pennucci, T. T.; Pol, N. S.; Ransom, S. M.; Ray, P. S.; Rasskazov, A.; Siemens, X.; Simon, J.; Spiewak, R.; Stairs, I. H.; Stinebring, D. R.; Stovall, K.; Swiggum, J.; Taylor, S. R.; Vallisneri, M.; van Haasteren, R.; Vigeland, S.; Zhu, W. W.
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Studies of the relativistic binary pulsar PSR B1534+12. I. Timing analysis
err2002-12-10
err182
errOAAI
errStairs, IH; Thorsett, SE; Taylor, JH; Wolszczan, A
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Short- and long-term changes in blood miRNA levels after nanogold injection in rats—potential biomarkers of nanoparticle exposure
err2012-10-03
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PREAI
errWee-Siong Chew; Kay-Wee Poh; Nikhat J Siddiqi; Abdullah S. Alhomida; Liya E Yu; Wei-Yi Ong
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Classifying galaxies according to their H I content
err2020-01-25
err3
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errAndrianomena, Sambatra; Rafieferantsoa, Mika; Dave, Romeel
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Different soil media for free-range laying hens
err2008-08-14
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errE.N. Sossidou; S.P. Rose; S.S.P. Silva; N.W. Hall; A. Tserveni-Goussi; V. Christodoulou
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Stable, Explicit, Leapfrog-Hopscotch Algorithms for the Diffusion Equation
err2021-08-20
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errÁdám Nagy; Issa Omle; Humam Kareem; Endre Kovács; Imre Ferenc Barna; Gabriella Bognar
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Multimessenger Gravitational-wave Searches with Pulsar Timing Arrays: Application to 3C 66B Using the NANOGrav 11-year Data Set
err2020-09-07
err34
errOAAI
errArzoumanian, Zaven; Baker, Paul T.; Brazier, Adam; Brook, Paul R.; Burke-Spolaor, Sarah; Becsy, Bence; Charisi, Maria; Chatterjee, Shami; Cordes, James M.; Cornish, Neil J.; Crawford, Fronefield; Cromartie, H. Thankful; Crowter, Kathryn; DeCesar, Megan E.; Demorest, Paul B.; Dolch, Timothy; Elliott, Rodney D.; Ellis, Justin A.; Ferdman, Robert D.; Ferrara, Elizabeth C.; Fonseca, Emmanuel; Garver-Daniels, Nathan; Gentile, Peter A.; Good, Deborah C.; Hazboun, Jeffrey S.; Islo, Kristina; Jennings, Ross J.; Jones, Megan L.; Kaiser, Andrew R.; Kaplan, David L.; Kelley, Luke Zoltan; Key, Joey Shapiro; Lam, Michael T.; W. Lazio, T. Joseph; Levin, Lina; Luo, Jing; Lynch, Ryan S.; Madison, Dustin R.; McLaughlin, Maura A.; Mingarelli, Chiara M. F.; Ng, Cherry; Nice, David J.; Pennucci, Timothy T.; Pol, Nihan S.; Ransom, Scott M.; Ray, Paul S.; Shapiro-Albert, Brent J.; Siemens, Xavier; Simon, Joseph; Spiewak, Renee; Stairs, Ingrid H.; Stinebring, Daniel R.; Stovall, Kevin; Swiggum, Joseph K.; Taylor, Stephen R.; Vallisneri, Michele; Vigeland, Sarah J.; Witt, Caitlin A.; Zhu, Weiwei
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SEARCHING FOR PULSARS USING IMAGE PATTERN RECOGNITION
err2014-01-16
err110
errOAAI
errZhu, W. W.; Berndsen, A.; Madsen, E. C.; Tan, M.; Stairs, I. H.; Brazier, A.; Lazarus, P.; Lynch, R.; Scholz, P.; Stovall, K.; Ransom, S. M.; Banaszak, S.; Biwer, C. M.; Cohen, S.; Dartez, L. P.; Flanigan, J.; Lunsford, G.; Martinez, J. G.; Mata, A.; Rohr, M.; Walker, A.; Allen, B.; Bhat, N. D. R.; Bogdanov, S.; Camilo, F.; Chatterjee, S.; Cordes, J. M.; Crawford, F.; Deneva, J. S.; Desvignes, G.; Ferdman, R. D.; Freire, P. C. C.; Hessels, J. W. T.; Jenet, F. A.; Kaplan, D. L.; Kaspi, V. M.; Knispel, B.; Lee, K. J.; van Leeuwen, J.; Lyne, A. G.; McLaughlin, M. A.; Siemens, X.; Spitler, L. G.; Venkataraman, A.
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Deep Bayesian Gaussian processes for uncertainty estimation in electronic health records
err2021-10-19
err16
errOAAI
errLi, Yikuan; Rao, Shishir; Hassaine, Abdelaali; Ramakrishnan, Rema; Canoy, Dexter; Salimi-Khorshidi, Gholamreza; Mamouei, Mohammad; Lukasiewicz, Thomas; Rahimi, Kazem
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