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PyPWDFT: A Lightweight Python Software for Single-Node 10K Atom Plane-Wave Density Functional Theory Calculations

delete2025-02-24
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PRE
AI
J
Jun Gao
L
Lizhong Fu
S
Shizhe Jiao
Z
Zhenlin Zhang
S
Sheng Chen
张致远 (Zhiyuan Zhang)
W
Wentiao Wu
L
Lingyun Wan
J
Jielan Li
胡伟 (Wei Hu) *
杨金龙 (Jinlong Yang) *
DOI:10.1021/acs.jctc.4c01605delete
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Abstract

Abstract

En 中文
PyPWDFT is a Python software designed for performing plane-wave density functional theory (DFT) calculations. It can perform large-scale DFT calculations using only a single process on a single node, including local density functional for 10,000 atoms and nonlocal hybrid functional for 4096 atoms. Our benchmark test results demonstrate that PyPWDFT achieves performance comparable to that of Fortran/C++ codes, despite being developed in a native Python environment. In addition, it requires only NumPy, SciPy, and CuPy, enabling CPU-GPU heterogeneous computing, achieving a two-order-of-magnitude speedup compared to single-threaded CPU execution. Due to its excellent cross-platform compatibility, medium-scale DFT calculations can be performed through a graphical user interface on personal computers and Windows systems using consumer-grade GPUs, such as the NVIDIA GeForce RTX 4090. The computational efficiency is comparable to that of professional-grade GPUs such as the NVIDIA V100. The efficient performance, scalability to handle large-scale systems, high numerical accuracy, and different interfaces for molecular dynamics collectively underscore the considerable potential of PyPWDFT to develop into versatile DFT software.
Keywords:
GENERALIZED GRADIENT APPROXIMATION
ELECTRONIC-STRUCTURE CALCULATIONS
MOLECULAR-ORBITAL METHODS
TOTAL-ENERGY CALCULATIONS
GAUSSIAN-TYPE BASIS
BASIS-SETS
CONVERGENCE ACCELERATION
DYNAMICS
EXCHANGE
PSEUDOPOTENTIALS

Journal

Journal of Chemical Theory and Computation cover
Journal of Chemical Theory and Computation
IF:
5.5
Papers:
1.1W
Citations:
5.4W

Organization

U
university of science & technology of china, cas
Scholars:
3.2W
Papers: 2.7W
Citations: 74
H
hefei national laboratory
Scholars:
344
Papers: 199
Citations: 0