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Saccharomyces Genome Database provides mutant phenotype data

delete2009-11-11
delete106
delete
OA
AI
S
Stacia R. Engel
R
Rama Balakrishnan
G
Gail Binkley
K
Karen Christie
M
Maria C. Costanzo
S
Selina S. Dwight
D
D. G. Fisk
J
Jodi Hirschman
B
B. C. Hitz
E
Eurie L. Hong
C
C. J. Krieger
M
Michael Livstone
S
Stuart R. Miyasato
R
Robert S Nash
R
Rose Oughtred
J
J. Park
M
Marek S. Skrzypek
S
Shuai Weng
E
Edith D. Wong
K
Kara Dolinski
D
David Botstein
J
J. Michael Cherry *
DOI:10.1093/nar/gkp917delete
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Abstract

Abstract

En 中文
The Saccharomyces Genome Database (SGD; http://www.yeastgenome.org) is a scientific database for the molecular biology and genetics of the yeast Saccharomyces cerevisiae, which is commonly known as baker's or budding yeast. The information in SGD includes functional annotations, mapping and sequence information, protein domains and structure, expression data, mutant phenotypes, physical and genetic interactions and the primary literature from which these data are derived. Here we describe how published phenotypes and genetic interaction data are annotated and displayed in SGD.
Keywords:
ONTOLOGY
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Journal

Nucleic Acids Research cover
Nucleic Acids Research
IF:
13.1
Papers:
3.6W
Citations:
29.0W

Organization

P
Princeton University
Scholars:
2.1W
Papers: 2.3W
Citations: 5.1W
S
Stanford University
Scholars:
9.6W
Papers: 8.2W
Citations: 17.0W
Cited Papers

Cited Papers

Gene Ontology annotations at SGD: new data sources and annotation methods
err2007-12-23
err230
errOAAI
errHong, Eurie L.; Balakrishnan, Rama; Dong, Qing; Christie, Karen R.; Park, Julie; Binkley, Gail; Costanzo, Maria C.; Dwight, Selina S.; Engel, Stacia R.; Fisk, Dianna G.; Hirschman, Jodi E.; Hitz, Benjamin C.; Krieger, Cynthia J.; Livstone, Michael S.; Miyasato, Stuart R.; Nash, Robert S.; Oughtred, Rose; Skrzypek, Marek S.; Weng, Shuai; Wong, Edith D.; Zhu, Kathy K.; Dolinski, Kara; Botstein, David; Cherry, J. Michael
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ChEBI:: a database and ontology for chemical entities of biological interest
err2007-12-23
err796
errOAAI
errDegtyarenko, Kirill; de Matos, Paula; Ennis, Marcus; Hastings, Janna; Zbinden, Martin; McNaught, Alan; Alcantara, Rafael; Darsow, Michael; Guedj, Mickael; Ashburner, Michael
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The BioGRID interaction database:: 2008 update
err2007-12-23
err633
errOAAI
errBreitkreutz, Bobby-Joe; Stark, Chris; Reguly, Teresa; Boucher, Lorrie; Breitkreutz, Ashton; Livstone, Michael; Oughtred, Rose; Lackner, Daniel H.; Bahler, Jurg; Wood, Valerie; Dolinski, Kara; Tyers, Mike
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The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration
err2007-11-07
err1.6K
errOAAI
errSmith, Barry; Ashburner, Michael; Rosse, Cornelius; Bard, Jonathan; Bug, William; Ceusters, Werner; Goldberg, Louis J.; Eilbeck, Karen; Ireland, Amelia; Mungall, Christopher J.; Leontis, Neocles; Rocca-Serra, Philippe; Ruttenberg, Alan; Sansone, Susanna-Assunta; Scheuermann, Richard H.; Shah, Nigam; Whetzel, Patricia L.; Lewis, Suzanna
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