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Transformer Model for Functional Near-Infrared Spectroscopy Classification

delete2022-06-01
delete26
PRE
AI
Z
Zenghui Wang
J
Jun Zhang *
张效初 (Xiaochu Zhang)
C
Chen, Peng
W
Wang, Bing
DOI:10.1109/JBHI.2022.3140531delete
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Abstract

Abstract

En 中文
Functional near-infrared spectroscopy (fNIRS) is a promising neuroimaging technology. The fNIRS classification problem has always been the focus of the brain-computer interface (BCI). Inspired by the success of Transformer based on self-attention mechanism in the fields of natural language processing and computer vision, we propose an fNIRS classification network based on Transformer, named fNIRS-T. We explore the spatial-level and channel-level representation of fNIRS signals to improve data utilization and network representation capacity. Besides, a preprocessing module, which consists of one-dimensional average pooling and layer normalization, is designed to replace filtering and baseline correction of data preprocessing. It makes fNIRS-T an end-to-end network, called fNIRS-PreT. Compared with traditional machine learning classifiers, convolutional neural network (CNN), and long short-term memory (LSTM), the proposed models obtain the best accuracy on three open-access datasets. Specifically, in the most extensive ternary classification task (30 subjects) that includes three types of overt movements, fNIRS-T, CNN, and LSTM obtain 75.49%, 72.89%, and 61.94% on test sets, respectively. Compared to traditional classifiers, fNIRS-T is at least 27.41% higher than statistical features and 6.79% higher than well-designed features. In the individual subject experiment of the ternary classification task, fNIRS-T achieves an average subject accuracy of 78.22% and surpasses CNN and LSTM by a large margin of +4.75% and +11.33%. fNIRS-PreT using raw data also achieves competitive performance to fNIRS-T. Therefore, the proposed models improve the performance of fNIRS-based BCI significantly.
Keywords:
Functional near-infrared spectroscopy
Task analysis
Transformers
Feature extraction
Convolution
Hemodynamics
Deep learning
Brain-computer interface (BCI)
classificat- ion
end-to-end
functional near-infrared spectroscopy (fNIRS)
preprocessing module
self-attention
transformer

Journal

IEEE Journal of Biomedical and Health Informatics cover
IEEE Journal of Biomedical and Health Informatics
IF:
6.8
Papers:
4.5K
Citations:
2.0W

Organization

A
anhui university
Scholars:
1.9W
Papers: 1.2W
Citations: 24
C
chinese academy of sciences
Scholars:
56.1W
Papers: 44.8W
Citations: 704