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Using data mining to identify structural rules in proteins

delete2011-11-01
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PRE
AI
D
Diogo Stelle
M
Maria Camila N. Barioni
S
Scott, Luis P. *
DOI:10.1016/j.amc.2011.07.011delete
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Abstract

Abstract

En 中文
The progress in bioinformatics and biotechnology area has generated a huge amount of sequences that requires a detailed analysis. There are several data mining techniques that can be used to discovery patterns in large databases. This paper describes the development of a tool/methodology to extract hydrophobicity patterns/profiles that archives a specific secondary structure in proteins. The results indicate that association rules can be efficient method to investigate this kind of problem. This work contributes for two areas: prediction of protein structure and protein folding. (C) 2011 Elsevier Inc. All rights reserved.
Keywords:
Protein structure
Database
Data mining
Association rules
Bioinformatics

Journal

Applied Mathematics and Computation cover
Applied Mathematics and Computation
IF:
3.4
Papers:
2.3W
Citations:
3.3W

Organization

U
universidade federal do abc (ufabc)
Scholars:
3.5K
Papers: 3.3K
Citations: 1
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