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XVCF: Exquisite Visualization of VCF Data from Genomic Experiments

delete2026-06-20
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OA
AI
G
Ghaida Almuneef
A
Abdulrhman Aljouie
Y
Yahya Bokhari
A
Ahmed Almazroa
M
Mamoon Rashid *
DOI:10.1016/j.slast.2026.100447delete
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Abstract

Abstract

En 中文
• A GUI based light-weight R Shiny application to visualize genetic variant data. • Extended on powerful R packages to process and visualize Variant Call Format (VCF) data. • Also, provide visualization and summary plots for Cancer Mutation data. • Can accept i) VCF file and ii) ANNOVAR annotated tabular format independently. • Capability to integrate genetic variants with clinical data.
Keywords:
Variant Call Format (VCF)
ANNOVAR
genomic analysis
shiny app
graphical user interface
visualization
summarization
user-friendly
cancer genomes
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Journal

SLAS Technology cover
SLAS Technology
IF:
3.7
Papers:
225
Citations:
1.1K

Organization

K
King Abdullah International Medical Research Center
Scholars:
280
Papers: 104
Citations: 1.7K