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JASPAR 2026: expansion of transcription factor binding profiles and integration of deep learning models Ovek baydar, Damla; Rauluseviciute, Ieva; Aronsen, Dina R.; Blanc-Mathieu, Romain; Bonthuis, Ine; De beukelaer, Herman; Ferenc, Katalin; Jegou, Alice; Kumar, Vipin; Lemma, Roza Berhanu; Lucas, Jeremy; Pochon, Mathis; Yun, Chang M.; Ramalingam, Vivekanandan; Deshpande, Salil Sanjay; Patel, Aman; Marinov, Georgi k; Wang, Austin T.; Aguirre, Alejandro; Castro-Mondragon, Jaime a; Baranasic, Damir; Cheneby, Jeanne; Gundersen, Sveinung; Johansen, Morten; Khan, Aziz; Kuijjer, Marieke L.; Hovig, Eivind; Lenhard, Boris; Sandelin, Albin; Vandepoele, Klaas; Wasserman, Wyeth w; Parcy, Francois; Kundaje, Anshul; Mathelier, Anthony Share Save
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Conservation of regulatory elements with highly diverged sequences across large evolutionary distances Phan, Mai H. Q.; Zehnder, Tobias; Puntieri, Fiona; Magg, Andreas; Majchrzycka, Blanka; Antonovic, Milan; Wieler, Hannah; Lo, Bai-Wei; Baranasic, Damir; Lenhard, Boris; Muller, Ferenc; Vingron, Martin; Ibrahim, Daniel M. Share Save
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Roles for the long non-coding RNA Pax6os1/PAX6-AS1 in pancreatic beta cell function Lopez-Noriega, Livia; Callingham, Rebecca; Martinez-Sanchez, Aida; Nawaz, Sameena; Pizza, Grazia; Haberman, Nejc; Cvetesic, Nevena; Nguyen-Tu, Marie-Sophie; Lenhard, Boris; Marchetti, Piero; de Koning, Eelco; Shapiro, A. M. James; Johnson, Paul R.; Leclerc, Isabelle; Hastoy, Benoit; Gauthier, Benoit R.; Pullen, Timothy J.; Rutter, Guy A. Share Save
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Liver kinase B1 (LKB1) regulates the epigenetic landscape of mouse pancreatic beta cells Haberman, Nejc; Cheung, Rebecca; Pizza, Grazia; Cvetesic, Nevena; Nagy, Dorka; Maude, Hannah; Blazquez, Lorea; Lenhard, Boris; Cebola, Ines; Rutter, Guy A.; Martinez-Sanchez, Aida Share Save
JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles Rauluseviciute, Ieva; Riudavets-Puig, Rafael; Blanc-Mathieu, Romain; Castro-Mondragon, Jaime A.; Ferenc, Katalin; Kumar, Vipin; Lemma, Roza Berhanu; Lucas, Jeremy; Cheneby, Jeanne; Baranasic, Damir; Khan, Aziz; Fornes, Oriol; Gundersen, Sveinung; Johansen, Morten; Hovig, Eivind; Lenhard, Boris; Sandelin, Albin; Wasserman, Wyeth W.; Parcy, Francois; Mathelier, Anthony Share Save
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A Novel Complex, RUNX1-MYEF2, Represses Hematopoietic Genes in Erythroid Cells van Riel, Boet; Pakozdi, Tibor; Brouwer, Rutger; Monteiro, Rui; Tuladhar, Kapil; Franke, Vedran; Bryne, Jan Christian; Jorna, Ruud; Rijkers, Erik-Jan; van Ijcken, Wilfred; Andrieu-Soler, Charlotte; Demmers, Jeroen; Patient, Roger; Soler, Eric; Lenhard, Boris; Grosveld, Frank Share Save
Liver RBFOX2 regulates cholesterol homeostasis via Scarb1 alternative splicing in mice Paterson, Helen A. B.; Yu, Sijia; Artigas, Natalia; Prado, Miguel A.; Haberman, Nejc; Wang, Yi-Fang; Jobbins, Andrew M.; Pahita, Elena; Mokochinski, Joao; Hall, Zoe; Guerin, Maryse; Paulo, Joao A.; Ng, Soon Seng; Villarroya, Francesc; Rashid, Sheikh Tamir; Le Goff, Wilfried; Lenhard, Boris; Cebola, Ines; Finley, Daniel; Gygi, Steven P.; Sibley, Christopher R.; Vernia, Santiago Share Save
Chromatin jets define the properties of cohesin-driven in vivo loop extrusion Guo, Ya; Al-Jibury, Ediem; Garcia-Millan, Rosalba; Ntagiantas, Konstantinos; King, James W. D.; Nash, Alex J.; Galjart, Niels; Lenhard, Boris; Rueckert, Daniel; Fisher, Amanda G.; Pruessner, Gunnar; Merkenschlager, Matthias Share Save
Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements Baranasic, Damir; Hortenhuber, Matthias; Balwierz, Piotr J.; Zehnder, Tobias; Mukarram, Abdul Kadir; Nepal, Chirag; Varnai, Csilla; Hadzhiev, Yavor; Jimenez-Gonzalez, Ada; Li, Nan; Wragg, Joseph; D'Orazio, Fabio M.; Relic, Dorde; Pachkov, Mikhail; Diaz, Noelia; Hernandez-Rodriguez, Benjamin; Chen, Zelin; Stoiber, Marcus; Dong, Michael; Stevens, Irene; Ross, Samuel E.; Eagle, Anne; Martin, Ryan; Obasaju, Oluwapelumi; Rastegar, Sepand; McGarvey, Alison C.; Kopp, Wolfgang; Chambers, Emily; Wang, Dennis; Kim, Hyejeong R.; Acemel, Rafael D.; Naranjo, Silvia; Lapinski, Maciej; Chong, Vanessa; Mathavan, Sinnakaruppan; Peers, Bernard; Sauka-Spengler, Tatjana; Vingron, Martin; Carninci, Piero; Ohler, Uwe; Lacadie, Scott Allen; Burgess, Shawn M.; Winata, Cecilia; van Eeden, Freek; Vaquerizas, Juan M.; Luis Gomez-Skarmeta, Jose; Onichtchouk, Daria; Brown, Ben James; Bogdanovic, Ozren; van Nimwegen, Erik; Westerfield, Monte; Wardle, Fiona C.; Daub, Carsten O.; Lenhard, Boris; Muller, Ferenc Share Save
Dysregulated RNA polyadenylation contributes to metabolic impairment in non-alcoholic fatty liver disease Jobbins, Andrew M.; Haberman, Nejc; Artigas, Natalia; Amourda, Christopher; Paterson, Helen A. B.; Yu, Sijia; Blackford, Samuel J., I; Montoya, Alex; Dore, Marian; Wang, Yi-Fang; Sardini, Alessandro; Cebola, Ines; Zuber, Johannes; Rashid, Sheikh Tamir; Lenhard, Boris; Vernia, Santiago Share Save
JASPAR 2022: the 9th release of the open-access database of transcription factor binding profiles Castro-Mondragon, Jaime A.; Riudavets-Puig, Rafael; Rauluseviciute, Ieva; Lemma, Roza Berhanu; Turchi, Laura; Blanc-Mathieu, Romain; Lucas, Jeremy; Boddie, Paul; Khan, Aziz; Perez, Nicolas Manosalva; Fornes, Oriol; Leung, Tiffany Y.; Aguirre, Alejandro; Hammal, Fayrouz; Schmelter, Daniel; Baranasic, Damir; Ballester, Benoit; Sandelin, Albin; Lenhard, Boris; Vandepoele, Klaas; Wasserman, Wyeth W.; Parcy, Francois; Mathelier, Anthony Share Save
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