Not logged in Updates to the Alliance of Genome Resources central infrastructure Aleksander, Suzanne A.; Anagnostopoulos, Anna V.; Antonazzo, Giulia; Arnaboldi, Valerio; Attrill, Helen; Becerra, Andres; Bello, Susan M.; Blodgett, Olin; Bradford, Yvonne M.; Bult, Carol J.; Cain, Scott; Calvi, Brian R.; Carbon, Seth; Chan, Juancarlos; Chen, Wen J.; Cherry, J. Michael; Cho, Jaehyoung; Crosby, Madeline A.; De Pons, Jeffrey L.; D'Eustachio, Peter; Diamantakis, Stavros; Dolan, Mary E.; dos Santos, Gilberto; Dyer, Sarah; Ebert, Dustin; Engel, Stacia R.; Fashena, David; Fisher, Malcolm; Foley, Saoirse; Gibson, Adam C.; Gollapally, Varun R.; Gramates, L. Sian; Grove, Christian A.; Hale, Paul; Harris, Todd; Hayman, G. Thomas; Hu, Yanhui; James-Zorn, Christina; Karimi, Kamran; Karra, Kalpana; Kishore, Ranjana; Kwitek, Anne E.; Laulederkind, Stanley J. F.; Lee, Raymond; Longden, Ian; Luypaert, Manuel; Markarian, Nicholas; Marygold, Steven J.; Matthews, Beverley; McAndrews, Monica S.; Millburn, Gillian; Miyasato, Stuart; Motenko, Howie; Moxon, Sierra; Muller, Hans-Michael; Mungall, Christopher J.; Muruganujan, Anushya; Mushayahama, Tremayne; Nash, Robert S.; Nuin, Paulo; Paddock, Holly; Pells, Troy; Perrimon, Norbert; Pich, Christian; Quinton-Tulloch, Mark; Raciti, Daniela; Ramachandran, Sridhar; Richardson, Joel E.; Gelbart, Susan Russo; Ruzicka, Leyla; Schindelman, Gary; Shaw, David R.; Sherlock, Gavin; Shrivatsav, Ajay; Singer, Amy; Smith, Constance M.; Smith, Cynthia L.; Smith, Jennifer R.; Stein, Lincoln; Sternberg, Paul W.; Tabone, Christopher J.; Thomas, Paul D.; Thorat, Ketaki; Thota, Jyothi; Tomczuk, Monika; Trovisco, Vitor; Tutaj, Marek A.; Urbano, Jose-Maria; Van Auken, Kimberly; Van Slyke, Ceri E.; Vize, Peter D.; Wang, Qinghua; Weng, Shuai; Westerfield, Monte; Wilming, Laurens G.; Wong, Edith D.; Wright, Adam; Yook, Karen; Zhou, Pinglei; Zorn, Aaron; Zytkovicz, Mark Share Save
Mouse Genome Database (MGD) 2019 Bult, Carol J.; Blake, Judith A.; Smith, Cynthia L.; Kadin, James A.; Richardson, Joel E.; Anagnostopoulos, A.; Asabor, R.; Baldarelli, R. M.; Beal, J. S.; Bello, S. M.; Blodgett, O.; Butler, N. E.; Christie, K. R.; Corbani, L. E.; Creelman, J.; Dolan, M. E.; Drabkin, H. J.; Giannatto, S. L.; Hale, P.; Hill, D. P.; Law, M.; Mendoza, A.; McAndrews, M.; Miers, D.; Motenko, H.; Ni, L.; Onda, H.; Perry, M.; Recla, J. M.; Richards-Smith, B.; Sitnikov, D.; Tomczuk, M.; Tonorio, G.; Wilming, L.; Zhu, Y. Share Save
Extension of human lncRNA transcripts by RACE coupled with long-read high-throughput sequencing (RACE-Seq) Lagarde, Julien; Uszczynska-Ratajczak, Barbara; Santoyo-Lopez, Javier; Gonzalez, Jose Manuel; Tapanari, Electra; Mudge, Jonathan M.; Steward, Charles A.; Wilming, Laurens; Tanzer, Andrea; Howald, Cedric; Chrast, Jacqueline; Vela-Boza, Alicia; Rueda, Antonio; Lopez-Domingo, Francisco J.; Dopazo, Joaquin; Reymond, Alexandre; Guigo, Roderic; Harrow, Jennifer Share Save
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NAR Breakthrough Article The Vertebrate Genome Annotation browser 10 years on Harrow, Jennifer L.; Steward, Charles A.; Frankish, Adam; Gilbert, James G.; Gonzalez, Jose M.; Loveland, Jane E.; Mudge, Jonathan; Sheppard, Dan; Thomas, Mark; Trevanion, Stephen; Wilming, Laurens G. Share Save
Current status and new features of the Consensus Coding Sequence database Farrell, Catherine M.; O'Leary, Nuala A.; Harte, Rachel A.; Loveland, Jane E.; Wilming, Laurens G.; Wallin, Craig; Diekhans, Mark; Barrell, Daniel; Searle, Stephen M. J.; Aken, Bronwen; Hiatt, Susan M.; Frankish, Adam; Suner, Marie-Marthe; Rajput, Bhanu; Steward, Charles A.; Brown, Garth R.; Bennett, Ruth; Murphy, Michael; Wu, Wendy; Kay, Mike P.; Hart, Jennifer; Rajan, Jeena; Weber, Janet; Snow, Catherine; Riddick, Lillian D.; Hunt, Toby; Webb, David; Thomas, Mark; Tamez, Pamela; Rangwala, Sanjida H.; McGarvey, Kelly M.; Pujar, Shashikant; Shkeda, Andrei; Mudge, Jonathan M.; Gonzalez, Jose M.; Gilbert, James G. R.; Trevanion, Stephen J.; Baertsch, Robert; Harrow, Jennifer L.; Hubbard, Tim; Ostell, James M.; Haussler, David; Pruitt, Kim D. Share Save
Structural and functional annotation of the porcine immunome Dawson, Harry D.; Loveland, Jane E.; Pascal, Geraldine; Gilbert, James G. R.; Uenishi, Hirohide; Mann, Katherine M.; Sang, Yongming; Zhang, Jie; Carvalho-Silva, Denise; Hunt, Toby; Hardy, Matthew; Hu, Zhiliang; Zhao, Shu-Hong; Anselmo, Anna; Shinkai, Hiroki; Chen, Celine; Badaoui, Bouabid; Berman, Daniel; Amid, Clara; Kay, Mike; Lloyd, David; Snow, Catherine; Morozumi, Takeya; Cheng, Ryan Pei-Yen; Bystrom, Megan; Kapetanovic, Ronan; Schwartz, John C.; Kataria, Ranjit; Astley, Matthew; Fritz, Eric; Steward, Charles; Thomas, Mark; Wilming, Laurens; Toki, Daisuke; Archibald, Alan L.; Bed'Hom, Bertrand; Beraldi, Dario; Huang, Ting-Hua; Ait-Ali, Tahar; Blecha, Frank; Botti, Sara; Freeman, Tom C.; Giuffra, Elisabetta; Hume, David A.; Lunney, Joan K.; Murtaugh, Michael P.; Reecy, James M.; Harrow, Jennifer L.; Rogel-Gaillard, Claire; Tuggle, Christopher K. Share Save
Sequencing and comparative analysis of the gorilla MHC genomic sequence Wilming, Laurens G.; Hart, Elizabeth A.; Coggill, Penny C.; Horton, Roger; Gilbert, James G. R.; Clee, Chris; Jones, Matt; Lloyd, Christine; Palmer, Sophie; Sims, Sarah; Whitehead, Siobhan; Wiley, David; Beck, Stephan; Harrow, Jennifer L. Share Save
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Tracking and coordinating an international curation effort for the CCDS Project Harte, Rachel A.; Farrell, Catherine M.; Loveland, Jane E.; Suner, Marie-Marthe; Wilming, Laurens; Aken, Bronwen; Barrell, Daniel; Frankish, Adam; Wallin, Craig; Searle, Steve; Diekhans, Mark; Harrow, Jennifer; Pruitt, Kim D. Share Save
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The GENCODE human gene set Searle, S.; Frankish, A.; Bignell, A.; Aken, B.; Derrien, T.; Diekhans, M.; Harte, R.; Howald, C.; Kokocinski, F.; Lin, M.; Tress, M.; Van Baren, M.; Barnes, I.; Hunt, T.; Carvalho-Silva, D.; Davidson, C.; Donaldson, S.; Gilbert, J.; Kay, M.; Lloyd, D.; Loveland, J.; Mudge, J.; Snow, C.; Vamathevan, J.; Wilming, L.; Brent, M.; Gerstein, M.; Guigo, R.; Kellis, M.; Reymond, A.; Zadissa, A.; Valencia, A.; Harrow, J.; Hubbard, T. Share Save
Discovery of Candidate Disease Genes in ENU-Induced Mouse Mutants by Large-Scale Sequencing, Including a Splice-Site Mutation in Nucleoredoxin Boles, Melissa K.; Wilkinson, Bonney M.; Wilming, Laurens G.; Liu, Bin; Probst, Frank J.; Harrow, Jennifer; Grafham, Darren; Hentges, Kathryn E.; Woodward, Lanette P.; Maxwell, Andrea; Mitchell, Karen; Risley, Michael D.; Johnson, Randy; Hirschi, Karen; Lupski, James R.; Funato, Yosuke; Miki, Hiroaki; Marin-Garcia, Pablo; Matthews, Lucy; Coffey, Alison J.; Parker, Anne; Hubbard, Tim J.; Rogers, Jane; Bradley, Allan; Adams, David J.; Justice, Monica J. Share Save
The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes Pruitt, Kim D.; Harrow, Jennifer; Harte, Rachel A.; Wallin, Craig; Diekhans, Mark; Maglott, Donna R.; Searle, Steve; Farrell, Catherine M.; Loveland, Jane E.; Ruef, Barbara J.; Hart, Elizabeth; Suner, Marie-Marthe; Landrum, Melissa J.; Aken, Bronwen; Ayling, Sarah; Baertsch, Robert; Fernandez-Banet, Julio; Cherry, Joshua L.; Curwen, Val; DiCuccio, Michael; Kellis, Manolis; Lee, Jennifer; Lin, Michael F.; Schuster, Michael; Shkeda, Andrew; Amid, Clara; Brown, Garth; Dukhanina, Oksana; Frankish, Adam; Hart, Jennifer; Maidak, Bonnie L.; Mudge, Jonathan; Murphy, Michael R.; Murphy, Terence; Rajan, Jeena; Rajput, Bhanu; Riddick, Lillian D.; Snow, Catherine; Steward, Charles; Webb, David; Weber, Janet A.; Wilming, Laurens; Wu, Wenyu; Birney, Ewan; Haussler, David; Hubbard, Tim; Ostell, James; Durbin, Richard; Lipman, David Share Save
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The H-Invitational Database (H-InvDB), a comprehensive annotation resource for human genes and transcripts Yamasaki, Chisato; Murakami, Katsuhiko; Fujii, Yasuyuki; Sato, Yoshiharu; Harada, Erimi; Takeda, Jun-Ichi; Taniya, Takayuki; Sakate, Ryuichi; Kikugawa, Shingo; Shimada, Makoto; Tanino, Motohiko; Koyanagi, Kanako O.; Barrero, Roberto A.; Gough, Craig; Chun, Hong-Woo; Habara, Takuya; Hanaoka, Hideki; Hayakawa, Yosuke; Hilton, Phillip B.; Kaneko, Yayoi; Kanno, Masako; Kawahara, Yoshihiro; Kawamura, Toshiyuki; Matsuya, Akihiro; Nagata, Naoki; Nishikata, Kensaku; Noda, Akiko Ogura; Nurimoto, Shin; Saichi, Naomi; Sakai, Hiroaki; Sanbonmatsu, Ryoko; Shiba, Rie; Suzuki, Mami; Takabayashi, Kazuhiko; Takahashi, Aiko; Tamura, Takuro; Tanaka, Masayuki; Tanaka, Susumu; Todokoro, Fusano; Yamaguchi, Kaori; Yamamoto, Naoyuki; Okido, Toshihisa; Mashima, Jun; Hashizume, Aki; Jin, Lihua; Lee, Kyung-Bum; Lin, Yi-Chueh; Nozaki, Asami; Sakai, Katsunaga; Tada, Masahito; Miyazaki, Satoru; Makino, Takashi; Ohyanagi, Hajime; Osato, Naoki; Tanaka, Nobuhiko; Suzuki, Yoshiyuki; Ikeo, Kazuho; Saitou, Naruya; Sugawara, Hideaki; O'Donovan, Claire; Kulikova, Tamara; Whitfield, Eleanor; Halligan, Brian; Shimoyama, Mary; Twigger, Simon; Yura, Kei; Kimura, Kouichi; Yasuda, Tomohiro; Nishikawa, Tetsuo; Akiyama, Yutaka; Motono, Chie; Mukai, Yuri; Nagasaki, Hideki; Suwa, Makiko; Horton, Paul; Kikuno, Reiko; Ohara, Osamu; Lancet, Doron; Eveno, Eric; Graudens, Esther; Imbeaud, Sandrine; Debily, Marie Anne; Hayashizaki, Yoshihide; Amid, Clara; Han, Michael; Osanger, Andreas; Endo, Toshinori; Thomas, Michael A.; Hirakawa, Mika; Makalowski, Wojciech; Nakao, Mitsuteru; Kim, Nam-Soon; Yoo, Hyang-Sook; De Souza, Sandro J.; Bonaldo, Maria de Fatima; Niimura, Yoshihito; Kuryshev, Vladimir; Schupp, Ingo; Wiemann, Stefan; Bellgard, Matthew; Shionyu, Masafumi; Jia, Libin; Thierry-Mieg, Danielle; Thierry-Mieg, Jean; Wagner, Lukas; Zhang, Qinghua; Go, Mitiko; Minoshima, Shinsei; Ohtsubo, Masafumi; Hanada, Kousuke; Tonellato, Peter; Isogai, Takao; Zhang, Ji; Lenhard, Boris; Kim, Sangsoo; Chen, Zhu; Hinz, Ursula; Estreicher, Anne; Nakai, Kenta; Makalowska, Izabela; Hide, Winston; Tiffin, Nicola; Wilming, Laurens; Chakraborty, Ranajit; Soares, Marcelo Bento; Chiusano, Maria Luisa; Suzuki, Yutaka; Auffray, Charles; Yamaguchi-Kabata, Yumi; Itoh, Takeshi; Hishiki, Teruyoshi; Fukuchi, Satoshi; Nishikawa, Ken; Sugano, Sumio; Nomura, Nobuo; Tateno, Yoshio; Imanishi, Tadashi; Gojobori, Takashi Share Save
Pseudo-messenger RNA: Phantoms of the transcriptome Frith, Martin C.; Wilming, Laurens G.; Forrest, Alistair; Kawaji, Hideya; Tan, Sin Lam; Wahlestedt, Claes; Bajic, Vladimir B.; Kai, Chikatoshi; Kawai, Jun; Carninci, Piero; Hayashizaki, Yoshihide; Bailey, Timothy L.; Huminiecki, Lukasz Share Save
Genomic anatomy of the Tyrp1 (brown) deletion complex Smyth, IM; Wilming, L; Lee, AW; Taylor, MS; Gautier, P; Barlow, K; Wallis, J; Martin, S; Glithero, R; Phillimore, B; Pelan, S; Andrew, R; Holt, K; Taylor, R; McLaren, S; Burton, J; Bailey, J; Sims, S; Squares, J; Plumb, B; Joy, A; Gibson, R; Gilbert, J; Hart, E; Laird, G; Loveland, J; Mudge, J; Steward, C; Swarbreck, D; Harrow, J; North, P; Leaves, N; Greystrong, J; Coppola, M; Manjunath, S; Campbell, M; Smith, M; Strachan, G; Tofts, C; Boal, E; Cobley, V; Hunter, G; Kimberley, C; Thomas, D; Cave-Berry, L; Weston, P; Botcherby, MRM; White, S; Edgar, R; Cross, SH; Irvani, M; Hummerich, H; Simpson, EH; Johnson, D; Hunsicker, PR; Little, PFR; Hubbard, T; Campbell, RD; Rogers, J; Jackson, IJ Share Save