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Natural and human-driven selection of a single non-coding body size variant in ancient and modern canids Plassais, Jocelyn; vonHoldt, Bridgett M.; Parker, Heidi G.; Carmagnini, Alberto; Dubos, Nicolas; Papa, Ilenia; Bevant, Kevin; Derrien, Thomas; Hennelly, Lauren M.; Whitaker, D. Thad; Harris, Alex C.; Hogan, Andrew N.; Huson, Heather J.; Zaibert, Victor F.; Linderholm, Anna; Haile, James; Fest, Thierry; Habib, Bilal; Sacks, Benjamin N.; Benecke, Norbert; Outram, Alan K.; Sablin, Mikhail, V; Germonpre, Mietje; Larson, Greger; Frantz, Laurent; Ostrander, Elaine A. Share Save
An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues (vol 10, 20457, 2020) Jehl, Frederic; Muret, Kevin; Bernard, Maria; Boutin, Morgane; Lagoutte, Laetitia; Desert, Colette; Dehais, Patrice; Esquerre, Diane; Acloque, Herve; Giuffra, Elisabetta; Djebali, Sarah; Foissac, Sylvain; Derrien, Thomas; Pitel, Frederique; Zerjal, Tatiana; Klopp, Christophe; Lagarrigue, Sandrine Share Save
Identification of common predisposing loci to hematopoietic cancers in four dog breeds Hedan, Benoit; Cadieu, Edouard; Rimbault, Maud; Vaysse, Amaury; Dufaure de Citres, Caroline; Devauchelle, Patrick; Botherel, Nadine; Abadie, Jerome; Quignon, Pascale; Derrien, Thomas; Andre, Catherine; Barsh, Gregory S.; Alvarez, Carlos; Barsh, Gregory S.; Alvarez, Carlos; Barsh, Gregory S.; Alvarez, Carlos Share Save
Long-read assembly of a Great Dane genome highlights the contribution of GC-rich sequence and mobile elements to canine genomes Halo, Julia, V; Pendleton, Amanda L.; Shen, Feichen; Doucet, Aurelien J.; Derrien, Thomas; Hitte, Christophe; Kirby, Laura E.; Myers, Bridget; Sliwerska, Elzbieta; Emery, Sarah; Moran, John, V; Boyko, Adam R.; Kidd, Jeffrey M. Share Save
Circulating tumor DNA is detectable in canine histiocytic sarcoma, oral malignant melanoma, and multicentric lymphoma Prouteau, Anais; Denis, Jerome Alexandre; De Fornel, Pauline; Cadieu, Edouard; Derrien, Thomas; Kergal, Camille; Botherel, Nadine; Ulve, Ronan; Rault, Melanie; Bouzidi, Amira; Francois, Romain; Dorso, Laetitia; Lespagnol, Alexandra; Devauchelle, Patrick; Abadie, Jerome; Andre, Catherine; Hedan, Benoit Share Save
An integrative atlas of chicken long non-coding genes and their annotations across 25 tissues Jehl, Frederic; Muret, Kevin; Bernard, Maria; Boutin, Morgane; Lagoutte, Laetitia; Desert, Colette; Dehais, Patrice; Esquerre, Diane; Acloque, Herve; Giuffra, Elisabetta; Djebali, Sarah; Foissac, Sylvain; Derrien, Thomas; Pitel, Frederique; Zerjal, Tatiana; Klopp, Christophe; Lagarrigue, Sandrine Share Save
PTPN11mutations in canine and human disseminated histiocytic sarcoma Hedan, Benoit; Rault, Melanie; Abadie, Jerome; Ulve, Ronan; Botherel, Nadine; Devauchelle, Patrick; Copie-Bergman, Christiane; Cadieu, Edouard; Parrens, Marie; Alten, Julia; Zalcman, Emmanuelle L.; Cario, Gunnar; Damaj, Gandhi; Mokhtari, Karima; Le Loarer, Francois; Coulomb-Lhermine, Aurore; Derrien, Thomas; Hitte, Christophe; Bachelot, Laura; Breen, Matthew; Gilot, David; Blay, Jean Y.; Donadieu, Jean; Andre, Catherine Share Save
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Characterisation and functional predictions of canine long non-coding RNAs Le Beguec, Celine; Wucher, Valentin; Lagoutte, Laetitia; Cadieul, Edouard; Botherel, Nadine; Hedan, Benoit; De Brito, Clotilde; Guillory, Anne-Sophie; Andre, Catherine; Derrien, Thomas; Hitte, Christophe Share Save
An exome sequencing based approach for genome-wide association studies in the dog Broeckx, Bart J. G.; Derrien, Thomas; Mottier, Stephanie; Wucher, Valentin; Cadieu, Edouard; Hedan, Benoit; Le Beguec, Celine; Botherel, Nadine; Lindblad-Toh, Kerstin; Saunders, Jimmy H.; Deforce, Dieter; Andre, Catherine; Peelman, Luc; Hitte, Christophe Share Save
Discovery of Human-Similar Gene Fusions in Canine Cancers Ulve, Ronan; Rault, Melanie; Bahin, Mathieu; Lagoutte, Laetitia; Abadie, Jerome; De Brito, Clotilde; Coindre, Jean-Michel; Botherel, Nadine; Rousseau, Audrey; Wucher, Valentin; Cadieu, Edouard; Thieblemont, Catherine; Hitte, Christophe; Cornevin, Laurence; Cabillic, Florian; Bachelot, Laura; Gilot, David; Hennuy, Benoit; Guillaudeux, Thierry; Le Goff, Arnaud; Derrien, Thomas; Hedan, Benoit; Andre, Catherine Share Save
Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species (vol 18, 27, 2017) Mathers, Thomas C.; Chen, Yazhou; Kaithakottil, Gemy; Legeai, Fabrice; Mugford, Sam T.; Baa-Puyoulet, Patrice; Bretaudeau, Anthony; Clavijo, Bernardo; Colella, Stefano; Collin, Olivier; Dalmay, Tamas; Derrien, Thomas; Feng, Honglin; Gabaldon, Toni; Jordan, Anna; Julca, Irene; Kettles, Graeme J.; Kowitwanich, Krissana; Lavenier, Dominique; Lenzi, Paolo; Lopez-Gomollon, Sara; Loska, Damian; Mapleson, Daniel; Maumus, Florian; Moxon, Simon; Price, Daniel R. G.; Sugio, Akiko; van Munster, Manuella; Uzest, Marilyne; Waite, Darren; Jander, Georg; Tagu, Denis; Wilson, Alex C. C.; van Oosterhout, Cock; Swarbreck, David; Hogenhout, Saskia A. Share Save
Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species Mathers, Thomas C.; Chen, Yazhou; Kaithakottil, Gemy; Legeai, Fabrice; Mugford, Sam T.; Baa-Puyoulet, Patrice; Bretaudeau, Anthony; Clavijo, Bernardo; Colella, Stefano; Collin, Olivier; Dalmay, Tamas; Derrien, Thomas; Feng, Honglin; Gabaldon, Toni; Jordan, Anna; Julca, Irene; Kettles, Graeme J.; Kowitwanich, Krissana; Lavenier, Dominique; Lenzi, Paolo; Lopez-Gomollon, Sara; Loska, Damian; Mapleson, Daniel; Maumus, Florian; Moxon, Simon; Price, Daniel R. G.; Sugio, Akiko; van Munster, Manuella; Uzest, Marilyne; Waite, Darren; Jander, Georg; Tagu, Denis; Wilson, Alex C. C.; van Oosterhout, Cock; Swarbreck, David; Hogenhout, Saskia A. Share Save
Long noncoding RNA repertoire in chicken liver and adipose tissue Muret, Kevin; Klopp, Christophe; Wucher, Valentin; Esquerre, Diane; Legeai, Fabrice; Lecerf, Frederic; Desert, Colette; Boutin, Morgane; Jehl, Frederic; Acloque, Herve; Giuffra, Elisabetta; Djebali, Sarah; Foissac, Sylvain; Derrien, Thomas; Lagarrigue, Sandrine Share Save
FEELnc: a tool for long non-coding RNA annotation and its application to the dog transcriptome Wucher, Valentin; Legeai, Fabrice; Hedan, Benoit; Rizk, Guillaume; Lagoutte, Laetitia; Leeb, Tosso; Jagannathan, Vidhya; Cadieu, Edouard; David, Audrey; Lohi, Hannes; Cirera, Susanna; Fredholm, Merete; Botherel, Nadine; Leegwater, Peter A. J.; Le Beguec, Celine; Fieten, Hille; Johnson, Jeremy; Alfoldi, Jessica; Andre, Catherine; Lindblad-Toh, Kerstin; Hitte, Christophe; Derrien, Thomas Share Save
A Point Mutation in a lincRNA Upstream of GDNF Is Associated to a Canine Insensitivity to Pain: A Spontaneous Model for Human Sensory Neuropathies Plassais, Jocelyn; Lagoutte, Laetitia; Correard, Solenne; Paradis, Manon; Guaguere, Eric; Hedan, Benoit; Pommier, Alix; Botherel, Nadine; Cadiergues, Marie-Christine; Pilorge, Philippe; Silversides, David; Bizot, Maud; Samuels, Mark; Arnan, Carme; Johnson, Rory; Hitte, Christophe; Salbert, Gilles; Mereau, Agnes; Quignon, Pascale; Derrien, Thomas; Andre, Catherine Share Save
Improved canine exome designs, featuring ncRNAs and increased coverage of protein coding genes Broeckx, Bart J. G.; Hitte, Christophe; Coopman, Frank; Verhoeven, Geert E. C.; De Keulenaer, Sarah; De Meester, Ellen; Derrien, Thomas; Alfoldi, Jessica; Lindblad-Toh, Kerstin; Bosmans, Tim; Gielen, Ingrid; Van Bree, Henri; Van Ryssen, Bernadette; Saunders, Jimmy H.; Van Nieuwerburgh, Filip; Deforce, Dieter Share Save
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