Karl F. Freed - Publications, H-index & Citations

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Karl F. Freed

university health network toronto

80H-index

735Paper Count

2.5WCitation Count

Published Papers 181

Publication Date

Challenges and Advantages of Accounting for Backbone Flexibility in Prediction of Protein-Protein Complexes

JOURNAL OF CHEMICAL THEORY AND COMPUTATION

IF5.5

2022-02-25

PREAI

Faruk, Nabil F.; Peng, Xiangda; Freed, Karl F.; Roux, Benoit; Sosnick, Tobin R.

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Prediction and Validation of a Protein's Free Energy Surface Using Hydrogen Exchange and (Importantly) Its Denaturant Dependence

JOURNAL OF CHEMICAL THEORY AND COMPUTATION

IF5.5

2021-12-22

OAAI

Peng, Xiangda; Baxa, Michael; Faruk, Nabil; Sachleben, Joseph R.; Pintscher, Sebastian; Gagnon, Isabelle A.; Houliston, Scott; Arrowsmith, Cheryl H.; Freed, Karl F.; Rocklin, Gabriel J.; Sosnick, Tobin R.

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Molecular dynamics study of water channels in natural and synthetic amyloid-β fibrils

JOURNAL OF CHEMICAL PHYSICS

IF3.1

2021-06-18

OAAI

Natesh, S. R.; Hummels, A. R.; Sachleben, J. R.; Sosnick, T. R.; Freed, K. F.; Douglas, J. F.; Meredith, S. C.; Haddadian, E. J.

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On the Interpretation of Force-Induced Unfolding Studies of Membrane Proteins Using Fast Simulations

BIOPHYSICAL JOURNAL

IF3.1

2019-10-01

OAAI

Wang, Zongan; Jumper, John M.; Freed, Karl F.; Sosnick, Tobin R.

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Lattice theory for binding of linear polymers to a solid substrate from polymer melts. II. Influence of van der Waals interactions and chain semiflexibility on molecular binding and adsorption

JOURNAL OF CHEMICAL PHYSICS

IF3.1

2019-09-30

PREAI

Dudowicz, Jacek; Douglas, Jack F.; Freed, Karl F.

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Lattice theory for binding of linear polymers to a solid substrate from polymer melts: I. Influence of chain connectivity on molecular binding and adsorption

JOURNAL OF CHEMICAL PHYSICS

IF3.1

2019-09-27

PREAI

Dudowicz, Jacek; Douglas, Jack F.; Freed, Karl F.

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Fast, Atomic-Level AFM and Magnetic Tweezers Simulations of the Unfolding of Membrane Proteins using a New Membrane Burial Potential with H-Bonding

BIOPHYSICAL JOURNAL

IF3.1

2019-02-01

OAAI

Wang, Zongan; Jumper, John M.; Freed, Karl F.; Sosnick, Tobin R.

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The Effect of Amyloid Precursor Protein Dimerization on its Conformation and Cleavage

BIOPHYSICAL JOURNAL

IF3.1

2019-02-01

OAAI

Usadi, Jacob B.; Freed, Karl; Haddadian, Esmael

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A Membrane Burial Potential with H-Bonds and Applications to Curved Membranes and Fast Simulations

BIOPHYSICAL JOURNAL

IF3.1

2018-11-01

OAAI

Wang, Zongan; Jumper, John M.; Wang, Sheng; Freed, Karl F.; Sosnick, Tobin R.

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Response to Comment on Innovative scattering analysis shows that hydrophobic disordered proteins are expanded in water

SCIENCE

IF45.8

2018-08-31

PREAI

Riback, Joshua A.; Bowman, Micayla A.; Zmyslowski, Adam; Knoverek, Catherine R.; Jumper, John; Kaye, Emily B.; Freed, Karl F.; Clark, Patricia L.; Sosnick, TobinR.

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Dielectric virial expansion of polarizable dipolar spheres

JOURNAL OF CHEMICAL PHYSICS

IF3.1

2018-08-09

OAAI

Lian, Huada; Qin, Jian; Freed, Karl F.

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Lattice theory of competitive binding: Influence of van der Waals interactions on molecular binding and adsorption to a solid substrate from binary liquid mixtures

JOURNAL OF CHEMICAL PHYSICS

IF3.1

2018-07-27