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Erik Poppleton

Arizona State University

16H-index
36Paper Count
1.3KCitation Count
Published Papers 18
Publication Date
PyFuRNAce: an integrated design engine for RNA origami
err2025-12-01
err0
errOAAI
errL. Monari; I. Braun; W. Verstraeten; E. Poppleton; K. Göpfrich
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ANNaMo: Coarse-grained modeling for folding and assembly of RNA and DNA systems
err2024-05-30
err3
errOAAI
errGuerra, F. Tosti; Poppleton, E.; Sulc, P.; Rovigatti, L.
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DNA-Nanostructure-Guided Assembly of Proteins into Programmable Shapes
err2024-01-26
err1
errOAAI
errLu, Qinyi; Xu, Yang; Poppleton, Erik; Zhou, Kun; Sulc, Petr; Stephanopoulos, Nicholas; Ke, Yonggang
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A rhythmically pulsing leaf-spring DNA-origami nanoengine that drives a passive follower
err2023-10-19
err11
errOAAI
errCentola, Mathias; Poppleton, Erik; Ray, Sujay; Centola, Martin; Welty, Robb; Valero, Julian; Walter, Nils G.; Sulc, Petr; Famulok, Michael
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RNA origami: design, simulation and application
err2023-07-27
err14
errOAAI
errPoppleton, Erik; Urbanek, Niklas; Chakraborty, Taniya; Griffo, Alessandra; Monari, Luca; Goepfrich, Kerstin
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Coarse-Grained Simulations for the Characterization and Optimization of Hybrid Protein-DNA Nanostructures
err2022-08-18
err5
errOAAI
errNarayanan, Raghu Pradeep; Procyk, Jonah; Nandi, Purbasha; Prasad, Abhay; Xu, Yang; Poppleton, Erik; Williams, Dewight; Zhang, Fei; Yan, Hao; Chiu, Po-Lin; Stephanopoulos, Nicholas; Sulc, Petr
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Design and simulation of DNA, RNA and hybrid protein-nucleic acid nanostructures with oxView
err2022-06-06
err45
PREAI
errBohlin, Joakim; Matthies, Michael; Poppleton, Erik; Procyk, Jonah; Mallya, Aatmik; Yan, Hao; Sulc, Petr
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Unified Nanotechnology Format: One Way to Store Them All
err2021-12-23
err5
errOAAI
errKutak, David; Poppleton, Erik; Miao, Haichao; Sulc, Petr; Barisic, Ivan
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Nanobase.org: a repository for DNA and RNA nanostructures
err2021-11-08
err20
errOAAI
errPoppleton, Erik; Mallya, Aatmik; Dey, Swarup; Joseph, Joel; Sulc, Petr
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OxDNA.org: a public webserver for coarse-grained simulations of DNA and RNA nanostructures
err2021-05-01
err28
errOAAI
errPoppleton, Erik; Romero, Roger; Mallya, Aatmik; Rovigatti, Lorenzo; Sulc, Petr
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Meta-DNA structures (vol 12, pg 1067, 2020)
err2020-11-24
err3
errOAAI
errYao, Guangbao; Zhang, Fei; Wang, Fei; Peng, Tianhuan; Liu, Hao; Poppleton, Erik; Sulc, Petr; Jiang, Shuoxing; Liu, Lan; Gong, Chen; Jing, Xinxin; Liu, Xiaoguo; Wang, Lihua; Liu, Yan; Fan, Chunhai; Yan, Hao
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Meta-DNA structures
err2020-09-07
err122
PREAI
errYao, Guangbao; Zhang, Fei; Wang, Fei; Peng, Tianhuan; Liu, Hao; Poppleton, Erik; Sulc, Petr; Jiang, Shuoxing; Liu, Lan; Gong, Chen; Jing, Xinxin; Liu, Xiaoguo; Wang, Lihua; Liu, Yan; Fan, Chunhai; Yan, Hao
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Design, optimization and analysis of large DNA and RNA nanostructures through interactive visualization, editing and molecular simulation
err2020-05-25
err104
errOAAI
errPoppleton, Erik; Bohlin, Joakim; Matthies, Michael; Sharma, Shuchi; Zhang, Fei; Sulc, Petr
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TacoxDNA: A user-friendly web server for simulations of complex DNA structures, from single strands to origami
err2019-07-13
err78
PREAI
errSuma, Antonio; Poppleton, Erik; Matthies, Michael; Sulc, Petr; Romano, Flavio; Louis, Ard A.; Doye, Jonathan P. K.; Micheletti, Cristian; Rovigatti, Lorenzo
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Triangulated Wireframe Structures Assembled Using Single-Stranded DNA Tiles
err2019-01-15
err24
PREAI
errMatthies, Michael; Agarwal, Nayan P.; Poppleton, Erik; Joshi, Foram M.; Sulc, Petr; Schmidt, Thorsten L.
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Enzymatic Phosphorylation of Ser in a Type I Collagen Peptide
err2018-12-01
err16
errOAAI
errQiu, Yimin; Poppleton, Erik; Mekkat, Arya; Yu, Hongtao; Banerjee, Sourav; Wiley, Sandra E.; Dixon, Jack E.; Kaplan, David L.; Lin, Yu-Shan; Brodsky, Barbara
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Root litter decomposition slows with soil depth
err2018-10-01
err125
errOAAI
errPries, Caitlin E. Hicks; Sulman, Benjamin N.; West, Corinna; O'Neill, Caitlin; Poppleton, Erik; Porras, Rachel C.; Castanha, Cristina; Zhu, Biao; Wiedemeier, Daniel B.; Torn, Margaret S.
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Effects of flexibility of the α2 chain of type I collagen on collagenase cleavage
err2018-09-01
err20
errOAAI
errMekkat, Arya; Poppleton, Erik; An, Bo; Visse, Robert; Nagase, Hideaki; Kaplan, David L.; Brodsky, Barbara; Li, Yu-Shan
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