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David S. Goodsell

University of California San Diego

66H-index
515Paper Count
6.6WCitation Count
Published Papers 84
Publication Date
Visualizing and analyzing 3D biomolecular structures using Mol* at RCSB.org: Influenza A H5N1 virus proteome case study
err2025-03-18
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errBittrich, Sebastian; Rose, Alexander S.; Sehnal, David; Duarte, Jose M.; Rose, Yana; Segura, Joan; Piehl, Dennis W.; Vallat, Brinda; Shao, Chenghua; Bhikadiya, Charmi; Liang, Jesse; Ma, Mark; Goodsell, David S.; Burley, Stephen K.; Dutta, Shuchismita
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Depicting a cellular space occupied by condensates
err2023-09-01
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errLiu, Daniel; Riggi, Margot; Lee, Hyun O.; Currie, Simon L.; Goodsell, David S.; Iwasa, Janet H.; Rog, Ofer
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Communicating science through visual means
err2023-01-01
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errOAAI
errLyall, Kip; Iwasa, Janet H.; Goodsell, David S.; Holt, Liam
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RCSB Protein Data Bank (RCSB.org): delivery of experimentally-determined PDB structures alongside one million computed structure models of proteins from artificial intelligence/machine learning
err2022-11-24
err294
errOAAI
errBurley, Stephen K.; Bhikadiya, Charmi; Bi, Chunxiao; Bittrich, Sebastian; Chao, Henry; Chen, Li; Craig, Paul A.; Crichlow, Gregg, V; Dalenberg, Kenneth; Duarte, Jose M.; Dutta, Shuchismita; Fayazi, Maryam; Feng, Zukang; Flatt, Justin W.; Ganesan, Sai; Ghosh, Sutapa; Goodsell, David S.; Green, Rachel Kramer; Guranovic, Vladimir; Henry, Jeremy; Hudson, Brian P.; Khokhriakov, Igor; Lawson, Catherine L.; Liang, Yuhe; Lowe, Robert; Peisach, Ezra; Persikova, Irina; Piehl, Dennis W.; Rose, Yana; Sali, Andrej; Segura, Joan; Sekharan, Monica; Shao, Chenghua; Vallat, Brinda; Voigt, Maria; Webb, Ben; Westbrook, John D.; Whetstone, Shamara; Young, Jasmine Y.; Zalevsky, Arthur; Zardecki, Christine
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Molecular explorations of cancer biology and therapeutics at PDB-101
err2022-08-10
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errGoodsell, David S.; Dutta, Shuchismita; Voigt, Maria; Zardecki, Christine; Burley, Stephen K.
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Exploring protein symmetry at the RCSB Protein Data Bank
err2022-07-08
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errOAAI
errDuarte, Jose M.; Dutta, Shuchismita; Goodsell, David S.; Burley, Stephen K.
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Evolution of the SARS-CoV-2 proteome in three dimensions (3D) during the first 6 months of the COVID-19 pandemic
err2021-10-09
err28
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errLubin, Joseph H.; Zardecki, Christine; Dolan, Elliott M.; Lu, Changpeng; Shen, Zhuofan; Dutta, Shuchismita; Westbrook, John D.; Hudson, Brian P.; Goodsell, David S.; Williams, Jonathan K.; Voigt, Maria; Sarma, Vidur; Xie, Lingjun; Venkatachalam, Thejasvi; Arnold, Steven; Alvarado, Luz Helena Alfaro; Catalfano, Kevin; Khan, Aaliyah; McCarthy, Erika; Staggers, Sophia; Tinsley, Brea; Trudeau, Alan; Singh, Jitendra; Whitmore, Lindsey; Zheng, Helen; Benedek, Matthew; Currier, Jenna; Dresel, Mark; Duvvuru, Ashish; Dyszel, Britney; Fingar, Emily; Hennen, Elizabeth M.; Kirsch, Michael; Khan, Ali A.; Labrie-Cleary, Charlotte; Laporte, Stephanie; Lenkeit, Evan; Martin, Kailey; Orellana, Marilyn; de la Campa, Melanie Ortiz-Alvarez; Paredes, Isaac; Wheeler, Baleigh; Rupert, Allison; Sam, Andrew; See, Katherine; Zapata, Santiago Soto; Craig, Paul A.; Hall, Bonnie L.; Jiang, Jennifer; Koeppe, Julia R.; Mills, Stephen A.; Pikaart, Michael J.; Roberts, Rebecca; Bromberg, Yana; Hoyer, J. Steen; Duffy, Siobain; Tischfield, Jay; Ruiz, Francesc X.; Arnold, Eddy; Baum, Jean; Sandberg, Jesse; Brannigan, Grace; Khare, Sagar D.; Burley, Stephen K.
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Seeing the PDB
err2021-01-01
err14
errOAAI
errRichardson, Jane S.; Richardson, David C.; Goodsell, David S.
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RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences
err2020-11-19
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errBurley, Stephen K.; Bhikadiya, Charmi; Bi, Chunxiao; Bittrich, Sebastian; Chen, Li; Crichlow, Gregg, V; Christie, Cole H.; Dalenberg, Kenneth; Di Costanzo, Luigi; Duarte, Jose M.; Dutta, Shuchismita; Feng, Zukang; Ganesan, Sai; Goodsell, David S.; Ghosh, Sutapa; Green, Rachel Kramer; Guranovic, Vladimir; Guzenko, Dmytro; Hudson, Brian P.; Lawson, Catherine L.; Liang, Yuhe; Lowe, Robert; Namkoong, Harry; Peisach, Ezra; Persikova, Irina; Randle, Chris; Rose, Alexander; Rose, Yana; Sali, Andrej; Segura, Joan; Sekharan, Monica; Shao, Chenghua; Tao, Yi-Ping; Voigt, Maria; Westbrook, John D.; Young, Jasmine Y.; Zardecki, Christine; Zhuravleva, Marina
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Art and Science of the Cellular Mesoscale
err2020-06-01
err25
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errGoodsell, David S.; Olson, Arthur J.; Forli, Stefano
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Insights from 20 Years of the Molecule of the Month and PDB-101
err2020-04-20
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PREAI
errZardecki, Christine; Berman, Helen; Burley, Stephen; Goodsell, David
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Late-onset retinal degeneration pathology due to mutations in CTRP5 is mediated through HTRA1
err2019-08-05
err26
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errChekuri, Anil; Zientara-Rytter, Katarzyna; Soto-Hermida, Angel; Borooah, Shyamanga; Voronchikhina, Marina; Biswas, Pooja; Kumar, Virender; Goodsell, David; Hayward, Caroline; Shaw, Peter; Stanton, Chloe; Garland, Donita; Subramani, Suresh; Ayyagari, Radha
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Novel Intersubunit Interaction Critical for HIV-1 Core Assembly Defines a Potentially Targetable Inhibitor Binding Pocket
errMBIO
IF4.7
err2019-04-30
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errCraveur, Pierrick; Gres, Anna T.; Kirby, Karen A.; Liu, Dandan; Hammond, John A.; Deng, Yisong; Forli, Stefano; Goodsell, David S.; Williamson, James R.; Sarafianos, Stefan G.; Olson, Arthur J.
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RCSB Protein Data Bank: biological macromolecular structures enabling research and education in fundamental biology, biomedicine, biotechnology and energy
err2018-10-24
err852
errOAAI
errBurley, Stephen K.; Berman, Helen M.; Bhikadiya, Charmi; Bi, Chunxiao; Chen, Li; Di Costanzo, Luigi; Christie, Cole; Dalenberg, Ken; Duarte, Jose M.; Dutta, Shuchismita; Feng, Zukang; Ghosh, Sutapa; Goodsell, David S.; Green, Rachel K.; Guranovic, Vladimir; Guzenko, Dmytro; Hudson, Brian P.; Kalro, Tara; Liang, Yuhe; Lowe, Robert; Namkoong, Harry; Peisach, Ezra; Periskova, Irina; Prlic, Andreas; Randle, Chris; Rose, Alexander; Rose, Peter; Sala, Raul; Sekharan, Monica; Shao, Chenghua; Tan, Lihua; Tao, Yi-Ping; Valasatava, Yana; Voigt, Maria; Westbrook, John; Woo, Jesse; Yang, Huanwang; Young, Jasmine; Zhuravleva, Marina; Zardecki, Christine
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Protein Data Bank: the single global archive for 3D macromolecular structure data
err2018-10-24
err682
errOAAI
errBurley, Stephen K.; Berman, Helen M.; Bhikadiya, Charmi; Bi, Chunxiao; Chen, Li; Di Costanzo, Luigi; Christie, Cole; Duarte, Jose M.; Dutta, Shuchismita; Feng, Zukang; Ghosh, Sutapa; Goodsell, David S.; Green, Rachel Kramer; Guranovic, Vladimir; Guzenko, Dmytro; Hudson, Brian P.; Liang, Yuhe; Lowe, Robert; Peisach, Ezra; Periskova, Irina; Randle, Chris; Rose, Alexander; Sekharan, Monica; Shao, Chenghua; Tao, Yi-Ping; Valasatava, Yana; Voigt, Maria; Westbrook, John; Young, Jasmine; Zardecki, Christine; Zhuravleva, Marina; Kurisu, Genji; Nakamura, Haruki; Kengaku, Yumiko; Cho, Hasumi; Sato, Junko; Kim, Ju Yaen; Ikegawa, Yasuyo; Nakagawa, Atsushi; Yamashita, Reiko; Kudou, Takahiro; Bekker, Gert-Jan; Suzuki, Hirofumi; Iwata, Takeshi; Yokochi, Masashi; Kobayashi, Naohiro; Fujiwara, Toshimichi; Velankar, Sameer; Kleywegt, Gerard J.; Anyango, Stephen; Armstrong, David R.; Berrisford, John M.; Conroy, Matthew J.; Dana, Jose M.; Deshpande, Mandar; Gane, Paul; Gaborova, Romana; Gupta, Deepti; Gutmanas, Aleksandras; Koca, Jaroslav; Mak, Lora; Mir, Saqib; Mukhopadhyay, Abhik; Nadzirin, Nurul; Nair, Sreenath; Patwardhan, Ardan; Paysan-Lafosse, Typhaine; Pravda, Lukas; Salih, Osman; Sehnal, David; Varadi, Mihaly; Varekova, Radka; Markley, John L.; Hoch, Jeffrey C.; Romero, Pedro R.; Baskaran, Kumaran; Maziuk, Dimitri; Ulrich, Eldon L.; Wedell, Jonathan R.; Yao, Hongyang; Livny, Miron; Ioannidis, Yannis E.
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A visual review of the human pathogen Streptococcus pneumoniae
err2017-10-05
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errEngholm, Ditte Hoyer; Kilian, Mogens; Goodsell, David S.; Andersen, Ebbe Sloth; Kjaergaard, Rikke Schmidt
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Fragment-Based Analysis of Ligand Dockings Improves Classification of Actives
err2016-07-25
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errBelew, Richard K.; Forli, Stefano; Goodsell, David S.; O'Donnell, T. J.; Olson, Arthur J.
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