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Comprehensive Characterization of the Cell States and Ecosystems in Classic Hodgkin Lymphoma Using Single-Cell RNA-Seq, Digital Deconvolution, and Machine Learning Su, Shengqin; Subramanian, Ajay; Flerlage, Timothy; Flerlage, Jamie E.; Rossi, Cedric; Noordenbos, Troy; Schroers-Martin, Joseph G.; Moding, Everett J.; Hoppe, Richard T.; Advani, Ranjana H.; Natkunam, Yasodha; Alizadeh, Ash A.; Binkley, Michael S. Share Save
Distinct Molecular Aberrations of Classic Hodgkin Lymphoma in Older Adults Identified By Comprehensive Genomic Profiling Rossi, Cedric; Boegeholz, Jan; Goldstein, Jordan S.; Shi, Shuyu; Su, Shengqin; Tessoulin, Benoit; Alig, Stefan K.; Garofalo, Andrea; Esfahani, Mohammad Shahrokh; Schroers-Martin, Joseph G.; Liu, Chih Long; Olsen, Mari; Kang, Xiaoman; Tian, Feng; Kurtz, David; Sugio, Takeshi; Noordenbos, Troy; Andre, Marc; Fornecker, Luc-Matthieu; Julia, Edith; Traverse-Glehen, Alexandra; Casasnovas, Olivier; Binkley, Michael S.; Diehn, Maximilian; Ghesquieres, Herve; Alizadeh, Ash A. Share Save
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CAR19 monitoring by peripheral blood immunophenotyping reveals histology-speci fi c expansion and toxicity Hamilton, Mark P.; Craig, Erin; Sanchez, Cesar Gentille; Mina, Alain; Tamaresis, John; Kirmani, Nadia; Ehlinger, Zachary; Syal, Shriya; Good, Zinaida; Sworder, Brian; Schroers-Martin, Joseph; Lu, Ying; Muffl, Lori; Negrin, Robert S.; Arai, Sally; Lowsky, Robert; Meyer, Everett; Rezvani, Andrew R.; Shizuru, Judith; Weng, Wen -Kai; Shiraz, Parveen; Sidana, Surbhi; Bharadwaj, Sushma; Smith, Melody; Dahiya, Saurabh; Sahaf, Bita; Kurtz, David M.; Mackall, Crystal L.; Tibshirani, Robert; Alizadeh, Ash A.; Frank, Matthew J.; Miklos, David B. Share Save
Cell-free RNA analysis for non-invasive cancer detection and characterization Nesselbush, Monica C.; Luca, Bogdan A.; Jeon, Young-Jun; Jabara, Isabel; Meador, Catherine B.; Binkley, Michael S.; Xu, Nova; Hui, Angela B.; Garofalo, Andrea; Shi, William Y.; Liu, Kevin J.; Sugio, Takeshi; Kastelowitz, Noah; Hamilton, Emily G.; Bonilla, Rene F.; Wang, Yi Peng; Jiang, Alice; Lau, Brianna; Eichholz, Jordan; Banwait, Mandeep; Schroers-Martin, Joseph; Boegeholz, Jan; King, Daniel A.; Esfahani, Mohammad S.; Raclin, Tyler; Tibshirani, Robert; Srinivas, Sandy; Nair, Viswam S.; Isbell, James M.; Li, Bob T.; Piotrowska, Zofia; Sequist, Lecia V.; Hata, Aaron N.; Neal, Joel W.; Wakelee, Heather A.; Gentles, Andrew J.; Alizadeh, Ash A.; Diehn, Maximilian Share Save
A human lymphoma organoid model for evaluating and targeting the follicular lymphoma tumor immune microenvironment Kastenschmidt, Jenna M.; Schroers-Martin, Joseph G.; Sworder, Brian J.; Sureshchandra, Suhas; Khodadoust, Michael S.; Liu, Chih Long; Olsen, Mari; Kurtz, David M.; Diehn, Maximilian; Wagar, Lisa E.; Alizadeh, Ash A. Share Save
RePhyNER: Overcoming limitations of access to matched germline for serial liquid biopsy applications Esfahani, Mohammad Shahrokh; Alig, Stefan; Hamilton, Emily; Schroers-Martin, Joseph; Sworder, Brian; Boegeholz, Jan; Olsen, Mari; Liu, Chih Long; Kurtz, David; Diehn, Maximilian; Alizadeh, Ash Share Save
Tracing Founder Mutations in Circulating and Tissue-Resident Follicular Lymphoma Precursors Schroers-Martin, Joseph G.; Soo, Joanne; Brisou, Gabriel; Scherer, Florian; Kurtz, David M.; Sworder, Brian J.; Khodadoust, Michael S.; Jin, Michael C.; Bru, Agnes; Liu, Chih Long; Stehr, Henning; Vineis, Paolo; Natkunam, Yasodha; Teras, Lauren R.; Song, Joo Y.; Nadel, Bertrand; Diehn, Maximilian; Roulland, Sandrine; Alizadeh, Ash A. Share Save
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Cellular and humoral immune response to SARS-CoV-2 vaccination and booster dose in immunosuppressed patients: An observational cohort study Yang, Lu M.; Costales, Cristina; Ramanathan, Muthukumar; Bulterys, Philip L.; Murugesan, Kanagavel; Schroers-Martin, Joseph; Alizadeh, Ash A.; Boyd, Scott D.; Brown, Janice M.; Nadeau, Kari C.; Nadimpalli, Sruti S.; Wang, Aileen X.; Busque, Stephan; Pinsky, Benjamin A.; Banaei, Niaz Share Save
Inferring gene expression from cell-free DNA fragmentation profiles Esfahani, Mohammad Shahrokh; Hamilton, Emily G.; Mehrmohamadi, Mahya; Nabet, Barzin Y.; Alig, Stefan K.; King, Daniel A.; Steen, Chloe B.; Macaulay, Charles W.; Schultz, Andre; Nesselbush, Monica C.; Soo, Joanne; Schroers-Martin, Joseph G.; Chen, Binbin; Binkley, Michael S.; Stehr, Henning; Chabon, Jacob J.; Sworder, Brian J.; Hui, Angela B-Y; Frank, Matthew J.; Moding, Everett J.; Liu, Chih Long; Newman, Aaron M.; Isbell, James M.; Rudin, Charles M.; Li, Bob T.; Kurtz, David M.; Diehn, Maximilian; Alizadeh, Ash A. Share Save
CD20-Targeted Therapy Ablates De Novo Antibody Response to Vaccination but Spares Preestablished Immunity Shree, Tanaya; Shankar, Vishnu; Lohmeyer, Julian J. K.; Czerwinski, Debra K.; Schroers-Martin, Joseph G.; Rodriguez, Gladys M.; Beygi, Sara; Kanegai, Alyssa M.; Corbelli, Karen S.; Gabriel, Etelka; Kurtz, David M.; Khodadoust, Michael S.; Gupta, Neel K.; Maeda, Lauren S.; Advani, Ranjana H.; Alizadeh, Ash A.; Levy, Ronald Share Save
Enhanced detection of minimal residual disease by targeted sequencing of phased variants in circulating tumor DNA Kurtz, David M.; Soo, Joanne; Keh, Lyron Co Ting; Alig, Stefan; Chabon, Jacob J.; Sworder, Brian J.; Schultz, Andre; Jin, Michael C.; Scherer, Florian; Garofalo, Andrea; Macaulay, Charles W.; Hamilton, Emily G.; Chen, Binbin; Olsen, Mari; Schroers-Martin, Joseph G.; Craig, Alexander F. M.; Moding, Everett J.; Esfahani, Mohammad S.; Liu, Chih Long; Duehrsen, Ulrich; Huettmann, Andreas; Casasnovas, Rene-Olivier; Westin, Jason R.; Roschewski, Mark; Wilson, Wyndham H.; Gaidano, Gianluca; Rossi, Davide; Diehn, Maximilian; Alizadeh, Ash A. Share Save
Circulating Tumor DNA Analysis for Detection of Minimal Residual Disease After Chemoradiotherapy for Localized Esophageal Cancer Azad, Tej D.; Chaudhuri, Aadel A.; Fang, Penny; Qiao, Yawei; Esfahani, Mohammad S.; Chabon, Jacob J.; Hamilton, Emily G.; Yang, Yi D.; Lovejoy, Alex; Newman, Aaron M.; Kurtz, David M.; Jin, Michael; Schroers-Martin, Joseph; Stehr, Henning; Liu, Chih Long; Hui, Angela Bik-Yu; Patel, Viren; Maru, Dipen; Lin, Steven H.; Alizadeh, Ash A.; Diehn, Maximilian Share Save
Detection and Surveillance of Bladder Cancer Using Urine Tumor DNA Dudley, Jonathan C.; Schroers-Martin, Joseph; Lazzareschi, Daniel, V; Shi, William, V; Chen, Simon B.; Esfahani, Mohammad S.; Trivedi, Dharati; Chabon, Jacob J.; Chaudhuri, Aadel A.; Stehr, Henning; Liu, Chih Long; Lim, Harumi; Costa, Helio A.; Nabet, Barzin Y.; Sin, Mandy L. Y.; Liao, Joseph C.; Alizadeh, Ash A.; Diehn, Maximilian Share Save
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Pretreatment Circulating Tumor DNA for Risk Stratification of Locally Advanced Esophageal Cancer Treated With Chemoradiation and Surgery Azad, T. D.; Chaudhuri, A. A.; Newman, A.; Stehr, H.; Schroers-Martin, J.; Chabon, J. J.; Fang, P., Sr.; Qiao, Y.; Liao, Z.; Komaki, R. U.; Alizadeh, A. A.; Lin, S. H.; Diehn, M. Share Save
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