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C

César de la Fuente‐Núñez

University of Pennsylvania

60H-index
241Paper Count
1.6WCitation Count
Published Papers 133
Publication Date
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Computational design of antimicrobial peptide nanopores
errNature Chemical Biology
IF13.7
err2026-08-03
err0
errOAAI
errRahul Deb; Marcelo D. T. Torres; Ivo Kabelka; Jan Přibyl; Kateřina Dvořáková Bendová; Edo Vreeker; Markéta Koběrská; Gabriela Balíková Novotná; Miloš Petřík; Giovanni Maglia; Cesar de la Fuente-Nunez; Robert Vácha
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Mining the code of life for new antibiotics
errCell Host & Microbe
IF18.7
err2026-07-08
err0
PREAI
errAnna Crysler; Cesar de la Fuente-Nunez
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errSave
Deep learning reveals antimicrobial peptides within prions
errNature Microbiology
IF19.4
err2026-06-19
err0
errOAAI
errMarcelo D. T. Torres; Fangping Wan; Cesar de la Fuente-Nunez
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errSave
Open-source chemoinformatics platforms for multi-target structure-activity relationships
errCell Reports Physical Science
IF7.3
err2026-05-13
err0
errOAAI
errJ. Israel Espinoza-Castañeda; Cesar de la Fuente-Nunez; José L. Medina-Franco
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errSave
A generative artificial intelligence approach for peptide antibiotic optimization
errNature Machine Intelligence
IF23.9
err2026-05-13
err0
errOAAI
errMarcelo D. T. Torres; Yimeng Zeng; Fangping Wan; Natalie Maus; Jacob Gardner; Cesar de la Fuente-Nunez
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From generation to validation: Deep generative models for antimicrobial peptide discovery
errCurrent Opinion in Chemical Biology
IF6.1
err2026-04-28
err0
errOAAI
errZehua Sun; Xiaoyu Wang; Shibo Kuang; Jiangning Song; Cesar de la Fuente-Nunez
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Local structural constraints and charge distribution in the protegrin-1 arginine loop govern activity against colistin-resistant Klebsiella pneumoniae.
errDrug Resistance Updates
IF21.7
err2026-04-17
err0
errOAAI
errChristina DeBarro; Sofia Assent; Hannah Makhecha; Rakesh Krishnan; Noor Radde; Justin Randall; Cesar de la Fuente-Nunez; Renee M. Fleeman
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errSave
Exploring and Expanding the Chemical Multiverse of Peptides
errChem. Sci.
IF0
err2025-12-18
err0
errOAAI
errEDGAR LOPEZ LOPEZ; Jean Paul Sánchez Castañeda; Massyel S Martinez-Cortés; Cesar de la Fuente-Nunez; José Luis Medina-Franco
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Molecular response to the non-lytic peptide bac7 (1-35) triggers disruption of Klebsiella pneumoniae biofilm
errPLOS PATHOGENS
IF4.9
err2025-12-01
err0
PREAI
errBeckman, Robert L.; Martinez, Berta; Santiago, Flor Z.; Echeverria, Gabriela N.; Pinheiro, Bruno V.; Torres, Marcelo D. T.; Suits, Logan; Garcia, Shantal; Wantuch, Paeton L.; De La Fuente-nunez, Cesar; Eswara, Prahathees; Rosen, David A.; Fleeman, Renee M.
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Deep learning speeds the search for new antibiotic scaffolds
errNature Biotechnology
IF41.7
err2025-10-24
err0
PREAI
errYumeng Zhang; Jiangning Song; Cesar de la Fuente-Nunez
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Tailored structured peptide design with a key-cutting machine approach
errNature Machine Intelligence
IF23.9
err2025-10-21
err0
errOAAI
errYan C. Leyva; Marcelo D. T. Torres; Carlos A. Oliva; Cesar de la Fuente-Nunez; Carlos A. Brizuela
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errSave
Small but mighty: emerging roles of uORFs in plants
errTrends in Biotechnology
IF14.9
err2025-10-03
err0
PREAI
errFarhad Nazarian-Firouzabadi; Jianing Bai; Cesar de la Fuente-Nunez
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errSave
Exploring the Antimicrobial and Antiviral Properties of Cryptic Peptides from Human Fibrinogen
errInternational Journal of Molecular Sciences 2025, Vol. 26, Page 8914
IF4.9
err2025-09-21
err0
errOAAI
errAndrea Bosso; Antonio Masino; Ilaria Di Nardo; Carla Zannella; Rosa Gaglione; Ida Palumbo; Rosanna Culurciello; Anna De Filippis; Marcelo D. T. Torres; Cesar de la Fuente-Nunez; Massimiliano Galdiero; Angela Arciello; Antimo Di Maro; Elio Pizzo; Valeria Cafaro; Eugenio Notomista
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Solving the data bottleneck for artificial intelligence in infectious diseases
errThe Lancet Infectious Diseases
IF0
err2025-09-16
err0
PREAI
errCesar de la Fuente-Nunez
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errSave
Deep learning reveals antibiotics in the archaeal proteome
errNature Microbiology
IF19.4
err2025-08-12
err0
errOAAI
errMarcelo D. T. Torres; Fangping Wan; Cesar de la Fuente-Nunez
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errSave
Deep learning unlocks antimicrobial self-assembling peptides
errNature Materials
IF38.5
err2025-07-21
err0
PREAI
errXiaoqiong Xia; Cesar de la Fuente-Nunez
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errSave
Computational exploration of global venoms for antimicrobial discovery with Venomics artificial intelligence
errNature Communications
IF15.7
err2025-07-12
err0
errOAAI
errChangge Guan; Marcelo D. T. Torres; Sufen Li; Cesar de la Fuente-Nunez
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errSave
Mitochondrial complex IV remodeling in tumor-associated macrophages amplifies interferon signaling and promotes anti-tumor immunity
errImmunity
IF26.3
err2025-06-30
err0
PREAI
errMegan L. Clark; Kamen P. Simeonov; Walter K. Mowel; Michaël F. Michieletto; Leonel Joannas; Jasmine M. Wright; Isabel Erickson; Lexus R. Johnson; Rakesh Krishnan; César de la Fuente-Núñez; Andy J. Minn; Jorge Henao-Mejia
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errSave
Honoring Robert E. W. Hancock: A Legacy of Innovation in Microbiology and Infectious Disease Research
errACS INFECTIOUS DISEASES
IF3.8
err2025-04-02
err0
PREAI
errde la Fuente-Nunez, C; Haldar, J
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Frog-derived synthetic peptides display anti-infective activity against Gram-negative pathogens
errTrends in Biotechnology
IF14.9
err2025-03-25
err0
errOAAI
errLucía Ageitos; Andreia Boaro; Angela Cesaro; Marcelo D.T. Torres; Esther Broset; Cesar de la Fuente-Nunez
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Research Directions

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Co-authors
Cooperation Journals
A
Ali Khademhosseini
H-index: 177 · Papers: 1.1K
D
Daniel J. Rader
H-index: 172 · Papers: 1.5K
R
Robert E. W. Hancock
H-index: 166 · Papers: 966
S
Stefan H. E. Kaufmann
H-index: 140 · Papers: 1.4K
F
Frederic D. Bushman
H-index: 139 · Papers: 780
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