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Comparative analysis of RNA expression identifies effective targeted drug in myoepithelial carcinoma Vasquez, Yvonne A.; Sanders, Lauren; Beale, Holly C.; Lyle, A. Geoffrey; Kephart, Ellen T.; Learned, Katrina; Peralez, Jennifer; Li, Amy; Huang, Min; Pyke-Grimm, Kimberly A.; Tan, Serena Y.; Salama, Sofie R.; Haussler, David; Bjork, Isabel; Vaske, Olena M.; Spunt, Sheri L. Share Save
Optogenetic Modulation of Network Activity in Human Hippocampus Andrews, John P.; Geng, Sury Jinghui; Voitiuk, Kateryna; Elliot, Matthew; Shin, David; Robbins, Ash; Spaeth, Alex; Wang, Albert; Li, Lin; Solis, Daniel; Keefe, Matthew; Sevetson, Jessica; Jesus, Julio Rivera-de; Donohue, Kevin; Larson, Hailey; Ehrlich, Drew; Auguste, Kurtis; Salama, Sofie; Sohal, Vikaas; Sharf, Tal; Haussler, David; Cadwell, Cathryn; Schafer, David; Chang, Edward; Teodorescu, Mircea; Nowakowski, Tomasz Share Save
Comparative analysis of RNA expression in a single institution cohort of pediatric cancer patients Vasquez, Yvonne A.; Beale, Holly C.; Sanders, Lauren; Lyle, A. Geoffrey; Kephart, Ellen T.; Learned, Katrina; Thompson, Drew; Peralez, Jennifer; Li, Amy; Huang, Min; Pyke-Grimm, Kimberly A.; Salama, Sofie R.; Haussler, David; Bjork, Isabel; Sheri, L. Spunt Share Save
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Modulation of neuronal activity in cortical organoids with bioelectronic delivery of ions and neurotransmitters Park, Yunjeong; Hernandez, Sebastian; Hernandez, Cristian O.; Schweiger, Hunter E.; Li, Houpu; Voitiuk, Kateryna; Dechiraju, Harika; Hawthorne, Nico; Muzzy, Elana M.; Selberg, John A.; Sullivan, Frederika N.; Urcuyo, Roberto; Salama, Sofie R.; Aslankoohi, Elham; Knight, Heather J.; Teodorescu, Mircea; Mostajo-Radji, Mohammed A.; Rolandi, Marco Share Save
Machine learning multi-omics analysis reveals cancer driver dysregulation in pan-cancer cell lines compared to primary tumors Sanders, Lauren M.; Chandra, Rahul; Zebarjadi, Navid; Beale, Holly C.; Lyle, A. Geoffrey; Rodriguez, Analiz; Kephart, Ellen Towle; Pfeil, Jacob; Cheney, Allison; Learned, Katrina; Currie, Rob; Gitlin, Leonid; Vengerov, David; Haussler, David; Salama, Sofie R.; Vaske, Olena M. Share Save
Modular automated microfluidic cell culture platform reduces glycolytic stress in cerebral cortex organoids Seiler, Spencer T.; Mantalas, Gary L.; Selberg, John; Cordero, Sergio; Torres-Montoya, Sebastian; Baudin, Pierre, V; Ly, Victoria T.; Amend, Finn; Tran, Liam; Hoffman, Ryan N.; Rolandi, Marco; Green, Richard E.; Haussler, David; Salama, Sofie R.; Teodorescu, Mircea Share Save
IoT cloud laboratory: Internet of Things architecture for cellular biology Parks, David F.; Voitiuk, Kateryna; Geng, Jinghui; Elliott, Matthew A. T.; Keefe, Matthew G.; Jung, Erik A.; Robbins, Ash; Baudin, Pierre, V; Ly, Victoria T.; Hawthorne, Nico; Yong, Dylan; Sanso, Sebastian E.; Rezaee, Nick; Seveston, Jess L.; Seiler, Spencer T.; Currie, Rob; Pollen, Alex A.; Hengen, Keith B.; Nowakowski, Tomasz J.; Mostajo-Radji, Mohammed A.; Salama, Sofie R.; Teodorescu, Mircea; Haussler, David Share Save
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Low cost cloud based remote microscopy for biological sciences Baudin, Pierre, V; Ly, Victoria T.; Pansodtee, Pattawong; Jung, Erik A.; Currie, Robert; Hoffman, Ryan; Willsey, Helen Rankin; Pollen, Alex A.; Nowakowski, Tomasz J.; Haussler, David; Mostajo-Radji, Mohammed A.; Salama, Sofie R.; Teodorescu, Mircea Share Save
A Functional Precision Medicine Pipeline Combines Comparative Transcriptomics and Tumor Organoid Modeling to Identify Bespoke Treatment Strategies for Glioblastoma Reed, Megan R.; Lyle, A. Geoffrey; De Loose, Annick; Maddukuri, Leena; Learned, Katrina; Beale, Holly C.; Kephart, Ellen T.; Cheney, Allison; van den Bout, Anouk; Lee, Madison P.; Hundley, Kelsey N.; Smith, Ashley M.; DesRochers, Teresa M.; Vibat, Cecile Rose T.; Gokden, Murat; Salama, Sofie; Wardell, Christopher P.; Eoff, Robert L.; Vaske, Olena M.; Rodriguez, Analiz Share Save
Light-weight electrophysiology hardware and software platform for cloud-based neural recording experiments Voitiuk, Kateryna; Geng, Jinghui; Keefe, Matthew G.; Parks, David F.; Sanso, Sebastian E.; Hawthorne, Nico; Freeman, Daniel B.; Currie, Rob; Mostajo-Radji, Mohammed A.; Pollen, Alex A.; Nowakowski, Tomasz J.; Salama, Sofie R.; Teodorescu, Mircea; Haussler, David Share Save
Picroscope: low-cost system for simultaneous longitudinal biological imaging Ly, Victoria T.; Baudin, Pierre, V; Pansodtee, Pattawong; Jung, Erik A.; Voitiuk, Kateryna; Rosen, Yohei M.; Willsey, Helen Rankin; Mantalas, Gary L.; Seiler, Spencer T.; Selberg, John A.; Cordero, Sergio A.; Ross, Jayden M.; Rolandi, Marco; Pollen, Alex A.; Nowakowski, Tomasz J.; Haussler, David; Mostajo-Radji, Mohammed A.; Salama, Sofie R.; Teodorescu, Mircea Share Save
The case for using mapped exonic non-duplicate reads when reporting RNA-sequencing depth: examples from pediatric cancer datasets Beale, Holly C.; Roger, Jacquelyn M.; Cattle, Matthew A.; McKay, Liam T.; Thompson, Drew K. A.; Learned, Katrina; Lyle, A. Geoffrey; Kephart, Ellen T.; Currie, Rob; Du Linh Lam; Sanders, Lauren; Pfeil, Jacob; Vivian, John; Bjork, Isabel; Salama, Sofie R.; Haussler, David; Vaske, Olena M. Share Save
Identification of a differentiation stall in epithelial mesenchymal transition in histone H3-mutant diffuse midline glioma Sanders, Lauren M.; Cheney, Allison; Seninge, Lucas; van den Bout, Anouk; Chen, Marissa; Beale, Holly C.; Kephart, Ellen Towle; Pfeil, Jacob; Learned, Katrina; Lyle, A. Geoffrey; Bjork, Isabel; Haussler, David; Salama, Sofie R.; Vaske, Olena M. Share Save
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Determining accuracy of RNA sequencing data for gene expression profiling of single samples Beale, Holly C.; Roger, Jacquelyn M.; Cattle, Matthew A.; McKay, Liam T.; Learned, Katrina; Lyle, Geoff; Kephart, Ellen T.; Currie, Rob; Du Linh Lam; Sanders, Lauren; Pfeil, Jacob; Vivian, John; Bjork, Isabel; Salama, Sofie R.; Haussler, David; Vaske, Olena M. Share Save
Co-option of the lineage-specific LAVA retrotransposon in the gibbon genome Okhovat, Mariam; Nevonen, Kimberly A.; Davis, Brett A.; Michener, Pryce; Ward, Samantha; Milhaven, Mark; Harshman, Lana; Sohota, Ajuni; Fernandes, Jason D.; Salama, Sofie R.; O'Neil, Rachel J.; Ahituv, Nadav; Veeramah, Krishna R.; Carbone, Lucia Share Save
Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes Shafin, Kishwar; Pesout, Trevor; Lorig-Roach, Ryan; Haukness, Marina; Olsen, Hugh E.; Bosworth, Colleen; Armstrong, Joel; Tigyi, Kristof; Maurer, Nicholas; Koren, Sergey; Sedlazeck, Fritz J.; Marschall, Tobias; Mayes, Simon; Costa, Vania; Zook, Justin M.; Liu, Kelvin J.; Kilburn, Duncan; Sorensen, Melanie; Munson, Katy M.; Vollger, Mitchell R.; Monlong, Jean; Garrison, Erik; Eichler, Evan E.; Salama, Sofie; Haussler, David; Green, Richard E.; Akeson, Mark; Phillippy, Adam; Miga, Karen H.; Carnevali, Paolo; Jain, Miten; Paten, Benedict Share Save
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